WormBase Tree Display for Gene: WBGene00011375
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| WBGene00011375 | SMap | S_parent | Sequence | T02E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T02E1.2 | |||||||
| Molecular_name | T02E1.2 | ||||||||
| T02E1.2.1 | |||||||||
| CE32480 | |||||||||
| T02E1.2.2 | |||||||||
| Other_name | CELE_T02E1.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T02E1.2 | ||||||||
| DB_info | Database | AceView | gene | 1I796 | |||||
| WormQTL | gene | WBGene00011375 | |||||||
| WormFlux | gene | WBGene00011375 | |||||||
| NDB | locus_tag | CELE_T02E1.2 | |||||||
| NCBI | gene | 172605 | |||||||
| RefSeq | protein | NM_059840.9 | |||||||
| TREEFAM | TREEFAM_ID | TF321982 | |||||||
| TrEMBL | UniProtAcc | O02293 | |||||||
| UniProt_GCRP | UniProtAcc | O02293 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (15) | |||||||||
| Paralog | WBGene00016163 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00044383 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018754 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017343 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in RMED and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including D-glucose; Zidovudine; and antimycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Regulator protein, PHA-1 and Regulator protein PHA-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T02E1.2 | |||||||
| Corresponding_CDS_history | T02E1.2:wp90 | ||||||||
| Corresponding_transcript | T02E1.2.1 | ||||||||
| T02E1.2.2 | |||||||||
| Associated_feature | WBsf649371 | ||||||||
| WBsf664517 | |||||||||
| WBsf664518 | |||||||||
| WBsf219876 | |||||||||
| WBsf219877 | |||||||||
| WBsf219878 | |||||||||
| WBsf219879 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004103 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035057 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008165 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052209 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011633 | ||||||||
| Expr1035005 | |||||||||
| Expr1155841 | |||||||||
| Expr2005744 | |||||||||
| Expr2023958 | |||||||||
| Drives_construct | WBCnstr00030702 | ||||||||
| Construct_product | WBCnstr00030702 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction | WBInteraction000261087 | ||||||||
| WBInteraction000381015 | |||||||||
| WBInteraction000425350 | |||||||||
| WBInteraction000432721 | |||||||||
| WBInteraction000455088 | |||||||||
| Map_info | Positive | Positive_clone | T02E1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.69162 | |||||||
| Method | Gene |
