WormBase Tree Display for Gene: WBGene00011315
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| WBGene00011315 | SMap | S_parent | Sequence | T01C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mbr-1 | |||||||
| Sequence_name | T01C1.2 | ||||||||
| Molecular_name | T01C1.2 | ||||||||
| T01C1.2.1 | |||||||||
| CE39173 | |||||||||
| Other_name | CELE_T01C1.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | mbr-1 | ||||||||
| DB_info | Database | AceView | gene | XL336 | |||||
| WormQTL | gene | WBGene00011315 | |||||||
| WormFlux | gene | WBGene00011315 | |||||||
| NDB | locus_tag | CELE_T01C1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011315|UniProtKB=G5EGQ5 | |||||||
| family | PTHR21545 | ||||||||
| NCBI | gene | 187937 | |||||||
| RefSeq | protein | NM_077393.8 | |||||||
| SwissProt | UniProtAcc | G5EGQ5 | |||||||
| TREEFAM | TREEFAM_ID | TF319589 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGQ5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Sep 2005 14:01:21 | WBPerson1983 | Event | Acquires_merge | WBGene00011316 | ||||
| Name_change | CGC_name | mbr-1 | |||||||
| Acquires_merge | WBGene00011316 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mbr | ||||||||
| Allele (46) | |||||||||
| Strain (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020681 | ||||||||
| 00020682 | |||||||||
| 00020683 | |||||||||
| 00020684 | |||||||||
| 00020685 | |||||||||
| 00020686 | |||||||||
| 00118564 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in several structures, including AUA; intestine; nerve ring neurons; tail; and vulva. Is an ortholog of human LCOR (ligand dependent nuclear receptor corepressor) and LCORL (ligand dependent nuclear receptor corepressor like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01C1.2 | |||||||
| Corresponding_CDS_history | T01C1.2:wp149 | ||||||||
| Corresponding_transcript | T01C1.2.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf978339 | ||||||||
| WBsf1006800 | |||||||||
| WBsf1006801 | |||||||||
| WBsf1006802 | |||||||||
| WBsf1006803 | |||||||||
| WBsf1006804 | |||||||||
| WBsf1023759 | |||||||||
| WBsf1023760 | |||||||||
| Transcription_factor | WBTranscriptionFactor000844 | ||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr3681 | ||||||||
| Expr15385 | |||||||||
| Expr1020640 | |||||||||
| Expr1155720 | |||||||||
| Expr2013440 | |||||||||
| Expr2031674 | |||||||||
| Drives_construct (13) | |||||||||
| Construct_product | WBCnstr00009821 | ||||||||
| WBCnstr00011595 | |||||||||
| WBCnstr00022534 | |||||||||
| WBCnstr00030749 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (28) | |||||||||
| Map_info | Map | X | Position | 2.38666 | Error | 0.004516 | |||
| Positive | Positive_clone | T01C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5513 | |||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | T01C1.3 merged into T01C1.2 | Paper_evidence | WBPaper00026753 | ||||||
| Curator_confirmed | WBPerson1983 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
