WormBase Tree Display for Gene: WBGene00011251
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| WBGene00011251 | SMap | S_parent | Sequence | R11H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-22 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | R11H6.3 | ||||||||
| Molecular_name | R11H6.3a | ||||||||
| R11H6.3a.1 | |||||||||
| CE47246 | |||||||||
| R11H6.3b | |||||||||
| CE47200 | |||||||||
| R11H6.3c | |||||||||
| CE47080 | |||||||||
| R11H6.3b.1 | |||||||||
| R11H6.3c.1 | |||||||||
| Other_name | CELE_R11H6.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | glb-22 | ||||||||
| DB_info | Database | AceView | gene | 5P85 | |||||
| WormQTL | gene | WBGene00011251 | |||||||
| WormFlux | gene | WBGene00011251 | |||||||
| NDB | locus_tag | CELE_R11H6.3 | |||||||
| NCBI | gene | 187832 | |||||||
| RefSeq | protein | NM_001269671.3 | |||||||
| NM_001269673.4 | |||||||||
| NM_001269672.3 | |||||||||
| TrEMBL | UniProtAcc | H9G344 | |||||||
| H9G345 | |||||||||
| H9G343 | |||||||||
| UniProt_GCRP | UniProtAcc | H9G343 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Oct 2007 15:16:42 | WBPerson2970 | Name_change | CGC_name | glb-22 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (284) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00118510 | ||||||||
| 00118511 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | glb-22 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to be involved in oxygen transport. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11H6.3a | |||||||
| R11H6.3b | |||||||||
| R11H6.3c | |||||||||
| Corresponding_CDS_history | R11H6.3:wp230 | ||||||||
| Corresponding_transcript | R11H6.3a.1 | ||||||||
| R11H6.3b.1 | |||||||||
| R11H6.3c.1 | |||||||||
| Other_sequence | Dviv_isotig18014 | ||||||||
| HC04599 | |||||||||
| HBC06935_1 | |||||||||
| JI220327.1 | |||||||||
| JI484221.1 | |||||||||
| HCC09697_1 | |||||||||
| ES742957.1 | |||||||||
| Dviv_isotig18013 | |||||||||
| Associated_feature | WBsf1002073 | ||||||||
| WBsf1020883 | |||||||||
| WBsf232943 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017781 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051822 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8502 | ||||||||
| Expr1028633 | |||||||||
| Expr1155481 | |||||||||
| Expr2012058 | |||||||||
| Expr2030294 | |||||||||
| Drives_construct | WBCnstr00013331 | ||||||||
| WBCnstr00030806 | |||||||||
| Construct_product | WBCnstr00030806 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (120) | |||||||||
| SAGE_tag | SAGE:attattattctgatgaa | Strand | Antisense | ||||||
| SAGE:tttcaggttc | Strand | Antisense | |||||||
| SAGE:tgattgccta | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaaggtgtga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:cttcctcttcttgatga | Strand | Antisense | |||||||
| SAGE:ttgttttcag | Strand | Antisense | |||||||
| Interaction | WBInteraction000162828 | ||||||||
| WBInteraction000206850 | |||||||||
| WBInteraction000233806 | |||||||||
| WBInteraction000239825 | |||||||||
| WBInteraction000262695 | |||||||||
| WBInteraction000264226 | |||||||||
| WBInteraction000295848 | |||||||||
| WBInteraction000394283 | |||||||||
| WBInteraction000422342 | |||||||||
| Map_info | Map | V | Position | 6.54507 | Error | 0.004169 | |||
| Positive | Positive_clone | R11H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00032254 | |||||||||
| WBPaper00033099 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
