WormBase Tree Display for Gene: WBGene00011186
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| WBGene00011186 | SMap | S_parent | Sequence | R10D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-226 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | R10D12.5 | ||||||||
| Molecular_name | R10D12.5 | ||||||||
| R10D12.5.1 | |||||||||
| CE52265 | |||||||||
| Other_name | CELE_R10D12.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-226 | ||||||||
| DB_info | Database | AceView | gene | 5O429 | |||||
| WormQTL | gene | WBGene00011186 | |||||||
| WormFlux | gene | WBGene00011186 | |||||||
| NDB | locus_tag | CELE_R10D12.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011186|UniProtKB=Q9XVJ9 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 187762 | |||||||
| RefSeq | protein | NM_001356752.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322983 | |||||||
| TrEMBL | UniProtAcc | Q9XVJ9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVJ9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-226 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (115) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; sir-2.1; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R10D12.5 | |||||||
| Corresponding_CDS_history | R10D12.5:wp216 | ||||||||
| R10D12.5:wp261 | |||||||||
| Corresponding_transcript | R10D12.5.1 | ||||||||
| Other_sequence | MH10481 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017695 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051687 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019786 | ||||||||
| Expr1155361 | |||||||||
| Expr2010132 | |||||||||
| Expr2028373 | |||||||||
| Drives_construct | WBCnstr00030864 | ||||||||
| Construct_product | WBCnstr00030864 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (32) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | V | Position | 5.83923 | Error | 0.001982 | |||
| Positive | Positive_clone | R10D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
