WormBase Tree Display for Gene: WBGene00011152
expand all nodes | collapse all nodes | view schema
| WBGene00011152 | SMap | S_parent | Sequence | R09A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | R09A8.1 | |||||||
| Molecular_name | R09A8.1a | ||||||||
| R09A8.1a.1 | |||||||||
| CE53061 | |||||||||
| R09A8.1b | |||||||||
| CE53101 | |||||||||
| R09A8.1b.1 | |||||||||
| Other_name | CELE_R09A8.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R09A8.1 | ||||||||
| DB_info | Database | AceView | gene | XN231 | |||||
| WormQTL | gene | WBGene00011152 | |||||||
| WormFlux | gene | WBGene00011152 | |||||||
| NDB | locus_tag | CELE_R09A8.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011152|UniProtKB=D4PH97 | |||||||
| family | PTHR22880 | ||||||||
| NCBI | gene | 187722 | |||||||
| RefSeq | protein | NM_001373537.2 | |||||||
| NM_001373538.3 | |||||||||
| TrEMBL | UniProtAcc | B5U8M1 | |||||||
| Q21852 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21852 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Feb 2010 17:04:37 | WBPerson1983 | Event | Acquires_merge | WBGene00138710 | ||||
| Acquires_merge | WBGene00138710 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (89) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006226 | ||||||||
| 00006227 | |||||||||
| 00006228 | |||||||||
| 00006229 | |||||||||
| 00006230 | |||||||||
| 00073124 | |||||||||
| 00073125 | |||||||||
| Contained_in_operon | CEOPX153 | ||||||||
| Ortholog | chrX_pilon.g20289 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00011993 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00011153 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00017177 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable lysine-acetylated histone binding activity. Predicted to be involved in chromatin remodeling and regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of chromatin. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09A8.1a | |||||||
| R09A8.1b | |||||||||
| Corresponding_CDS_history | R09A8.1:wp194 | ||||||||
| R09A8.1a:wp270 | |||||||||
| R09A8.1b:wp270 | |||||||||
| R09A8.1c:wp270 | |||||||||
| Corresponding_transcript | R09A8.1a.1 | ||||||||
| R09A8.1b.1 | |||||||||
| Associated_feature | WBsf1007365 | ||||||||
| WBsf1007366 | |||||||||
| WBsf1007367 | |||||||||
| WBsf1007368 | |||||||||
| WBsf1024092 | |||||||||
| WBsf1024093 | |||||||||
| WBsf1024094 | |||||||||
| WBsf1024095 | |||||||||
| WBsf236498 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051582 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058559 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017619 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014549 | ||||||||
| Expr1034905 | |||||||||
| Expr1155254 | |||||||||
| Expr2005505 | |||||||||
| Expr2023724 | |||||||||
| Drives_construct | WBCnstr00030890 | ||||||||
| Construct_product | WBCnstr00030890 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (155) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | R09A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 7.25212 | |||||||
| Method | Gene |
