WormBase Tree Display for Gene: WBGene00011145
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WBGene00011145 | SMap | S_parent | Sequence | R08D7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R08D7.5 | |||||||
Molecular_name (3) | |||||||||
Other_name | CELE_R08D7.5 | Accession_evidence | NDB | BX284603 | |||||
Public_name | R08D7.5 | ||||||||
DB_info | Database | AceView | gene | 3K65 | |||||
WormQTL | gene | WBGene00011145 | |||||||
WormFlux | gene | WBGene00011145 | |||||||
NDB | locus_tag | CELE_R08D7.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011145|UniProtKB=P30644 | |||||||
family | PTHR23050 | ||||||||
NCBI | gene | 187699 | |||||||
RefSeq | protein | NM_066585.4 | |||||||
SwissProt | UniProtAcc | P30644 | |||||||
TREEFAM | TREEFAM_ID | TF101141 | |||||||
UniProt_GCRP | UniProtAcc | P30644 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00038803 | ||||||||
00038804 | |||||||||
00038805 | |||||||||
00038806 | |||||||||
00038807 | |||||||||
00113191 | |||||||||
Contained_in_operon | CEOP3560 | ||||||||
Ortholog (33) | |||||||||
Paralog (14) | |||||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in centriole replication and mitotic cell cycle. Predicted to be located in centriole and centrosome. Is an ortholog of human CETN2 (centrin 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R08D7.5 | |||||||
Corresponding_CDS_history | R08D7.5:wp94 | ||||||||
R08D7.5:wp254 | |||||||||
Corresponding_transcript | R08D7.5.1 | ||||||||
Other_sequence | CR07119 | ||||||||
Tcir_isotig19422 | |||||||||
CR06507 | |||||||||
Tcir_isotig22403 | |||||||||
CBC16009_1 | |||||||||
CRC04685_1 | |||||||||
Associated_feature | WBsf225503 | ||||||||
WBsf225504 | |||||||||
Experimental_info | RNAi_result | WBRNAi00051545 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034749 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062334 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017586 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00114653 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005229 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr37 | ||||||||
Expr1020303 | |||||||||
Expr1034902 | |||||||||
Expr1155223 | |||||||||
Expr2005492 | |||||||||
Expr2023712 | |||||||||
Drives_construct | WBCnstr00030895 | ||||||||
Construct_product | WBCnstr00030895 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (118) | |||||||||
SAGE_tag | SAGE:aagaagactt | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:atttcaaaaa | Strand | Antisense | |||||||
SAGE:atctctaattataatcc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gacgttgacgaactgtg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atctctaatt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gtgatatgag | Strand | Antisense | |||||||
SAGE:taatccttct | Strand | Antisense | |||||||
SAGE:atttcaaaaaactgttg | Strand | Antisense | |||||||
SAGE:gagagaagga | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gacgttgacg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (14) | |||||||||
Map_info | Positive | Positive_clone | R08D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 0.0556967 | |||||||
Reference | WBPaper00055090 | ||||||||
Method | Gene |