WormBase Tree Display for Gene: WBGene00011142
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| WBGene00011142 | SMap | S_parent | Sequence | R08D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bud-13 | |||||||
| Sequence_name | R08D7.1 | ||||||||
| Molecular_name | R08D7.1 | ||||||||
| R08D7.1.1 | |||||||||
| CE00289 | |||||||||
| Other_name | CELE_R08D7.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | bud-13 | ||||||||
| DB_info | Database | AceView | gene | 3K56 | |||||
| WormQTL | gene | WBGene00011142 | |||||||
| WormFlux | gene | WBGene00011142 | |||||||
| NDB | locus_tag | CELE_R08D7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011142|UniProtKB=P30640 | |||||||
| family | PTHR31809 | ||||||||
| NCBI | gene | 176266 | |||||||
| RefSeq | protein | NM_066581.6 | |||||||
| SwissProt | UniProtAcc | P30640 | |||||||
| TREEFAM | TREEFAM_ID | TF315331 | |||||||
| UniProt_GCRP | UniProtAcc | P30640 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | bud-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bud | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00040827 | ||||||||
| 00040828 | |||||||||
| 00040829 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of RES complex and U2-type spliceosomal complex. Is an ortholog of human BUD13 (BUD13 homolog). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08D7.1 | |||||||
| Corresponding_transcript | R08D7.1.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf651323 | ||||||||
| WBsf227213 | |||||||||
| WBsf227214 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1023847 | ||||||||
| Expr1034899 | |||||||||
| Expr1155219 | |||||||||
| Expr2005489 | |||||||||
| Expr2023709 | |||||||||
| Drives_construct | WBCnstr00030898 | ||||||||
| Construct_product | WBCnstr00030898 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | III | Position | 0.053339 | |||||
| Positive | Positive_clone | R08D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| WBPaper00064651 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
