WormBase Tree Display for Gene: WBGene00011134

WBGene00011134 SMap: S_parent: Sequence: R08A2
  Identity: Version: 2
    Name: CGC_name: ssp-33 Person_evidence: WBPerson261
      Sequence_name: R08A2.3
      Molecular_name: R08A2.3
        R08A2.3.1
        CE23904
      Other_name: CELE_R08A2.3 Accession_evidence: NDB BX284605
      Public_name: ssp-33
    DB_info: Database: AceView gene 5P191
        WormQTL gene WBGene00011134
        WormFlux gene WBGene00011134
        NDB locus_tag CELE_R08A2.3
        Panther gene CAEEL|WormBase=WBGene00011134|UniProtKB=Q9U393
          family PTHR22947
        NCBI gene 179974
        RefSeq protein NM_074229.5
        TrEMBL UniProtAcc Q9U393
        UniProt_GCRP UniProtAcc Q9U393
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 10 Nov 2010 15:19:39 WBPerson2970 Name_change: CGC_name: ssp-33
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssp
    Allele (11)
    RNASeq_FPKM (74)
    Ortholog (20)
    Paralog (33)
    Structured_description: Automated_description: Enriched in amphid sheath cell; germ line; and in male based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; D-glucose; and Alovudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R08A2.3
    Corresponding_transcript: R08A2.3.1
    Other_sequence: GW406158.1
      GW407892.1
    Associated_feature: WBsf1002113
      WBsf1020901
      WBsf232954
  Experimental_info: RNAi_result: WBRNAi00051522 Inferred_automatically: RNAi_primary
      WBRNAi00034735 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020228
      Expr1155196
    Drives_construct: WBCnstr00030903
    Construct_product: WBCnstr00030903
    Microarray_results (15)
    Expression_cluster (151)
    Interaction: WBInteraction000031235
  Map_info: Map: V Position: 6.7121 Error: 0.002293
    Positive: Positive_clone: R08A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene