WormBase Tree Display for Gene: WBGene00011120
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| WBGene00011120 | SMap | S_parent | Sequence | R07E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07E5.15 | |||||||
| Molecular_name | R07E5.15 | ||||||||
| R07E5.15.1 | |||||||||
| CE18126 | |||||||||
| Other_name | CELE_R07E5.15 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R07E5.15 | ||||||||
| DB_info | Database | AceView | gene | 3F491 | |||||
| WormQTL | gene | WBGene00011120 | |||||||
| WormFlux | gene | WBGene00011120 | |||||||
| NDB | locus_tag | CELE_R07E5.15 | |||||||
| NCBI | gene | 175570 | |||||||
| RefSeq | protein | NM_065488.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316596 | |||||||
| TrEMBL | UniProtAcc | O62342 | |||||||
| UniProt_GCRP | UniProtAcc | O62342 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| Strain | WBStrain00031766 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00008912 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011954 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011214 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; somatic gonad precursor; sperm; and in male based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; methylmercuric chloride; and manganese chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07E5.15 | |||||||
| Corresponding_transcript | R07E5.15.1 | ||||||||
| Other_sequence | CR01553 | ||||||||
| CRC08419_1 | |||||||||
| FG621216.1 | |||||||||
| CJC01179_1 | |||||||||
| Associated_feature | WBsf224730 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00017558 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013465 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053940 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034714 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005940 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019084 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051489 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005080 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1155168 | ||||||||
| Expr2005465 | |||||||||
| Expr2023686 | |||||||||
| Drives_construct | WBCnstr00030915 | ||||||||
| Construct_product | WBCnstr00030915 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (204) | |||||||||
| Interaction (97) | |||||||||
| Map_info | Positive | Positive_clone | R07E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.17773 | |||||||
| Method | Gene |
