WormBase Tree Display for Gene: WBGene00011100
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| WBGene00011100 | SMap | S_parent | Sequence | R07B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-209 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R07B7.16 | ||||||||
| Molecular_name | R07B7.16 | ||||||||
| R07B7.16.1 | |||||||||
| CE42934 | |||||||||
| Other_name | CELE_R07B7.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-209 | ||||||||
| DB_info | Database | AceView | gene | 5M579 | |||||
| WormQTL | gene | WBGene00011100 | |||||||
| WormFlux | gene | WBGene00011100 | |||||||
| NDB | locus_tag | CELE_R07B7.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011100|UniProtKB=Q21806 | |||||||
| family | PTHR24083 | ||||||||
| NCBI | gene | 187663 | |||||||
| RefSeq | protein | NM_073635.4 | |||||||
| SwissProt | UniProtAcc | Q21806 | |||||||
| TREEFAM | TREEFAM_ID | TF321591 | |||||||
| UniProt_GCRP | UniProtAcc | Q21806 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-209 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00037413 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (42) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07B7.16 | |||||||
| Corresponding_CDS_history | R07B7.16:wp193 | ||||||||
| Corresponding_transcript | R07B7.16.1 | ||||||||
| Other_sequence | CBC09032_1 | ||||||||
| Associated_feature | WBsf647329 | ||||||||
| WBsf661068 | |||||||||
| WBsf978466 | |||||||||
| WBsf232599 | |||||||||
| Transcription_factor | WBTranscriptionFactor000907 | ||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr9033 | ||||||||
| Expr1026450 | |||||||||
| Expr1034874 | |||||||||
| Expr1155122 | |||||||||
| Expr2014112 | |||||||||
| Expr2032351 | |||||||||
| Drives_construct | WBCnstr00030932 | ||||||||
| Construct_product | WBCnstr00030932 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000257218 | ||||||||
| WBInteraction000343333 | |||||||||
| WBInteraction000414128 | |||||||||
| Map_info | Map | V | Position | 3.64046 | Error | 0.001029 | |||
| Positive | Positive_clone | R07B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026592 | ||||||||
| WBPaper00034540 | |||||||||
| WBPaper00036257 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
