WormBase Tree Display for Gene: WBGene00011097
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WBGene00011097 | SMap | S_parent | Sequence | R07B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-206 | Person_evidence | WBPerson600 | |||||
Sequence_name | R07B7.13 | ||||||||
Molecular_name | R07B7.13a | ||||||||
R07B7.13a.1 | |||||||||
CE06275 | |||||||||
R07B7.13b | |||||||||
CE48399 | |||||||||
R07B7.13b.1 | |||||||||
Other_name | CELE_R07B7.13 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-206 | ||||||||
DB_info | Database | AceView | gene | 5M573 | |||||
WormQTL | gene | WBGene00011097 | |||||||
WormFlux | gene | WBGene00011097 | |||||||
NDB | locus_tag | CELE_R07B7.13 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011097|UniProtKB=Q21803 | |||||||
family | PTHR24083 | ||||||||
NCBI | gene | 187660 | |||||||
RefSeq | protein | NM_001307750.3 | |||||||
NM_073632.6 | |||||||||
TrEMBL | UniProtAcc | Q21803 | |||||||
N1NTC6 | |||||||||
UniProt_GCRP | UniProtAcc | Q21803 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-206 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (31) | |||||||||
Strain | WBStrain00036547 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (39) | |||||||||
Paralog (42) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. Expressed in several structures, including anal sphincter muscle; hyp12; rectal gland cell; tail hypodermis; and vulva. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result (9) | ||||||||
Expr_pattern | Expr7633 | ||||||||
Expr9030 | |||||||||
Expr9039 | |||||||||
Expr1019675 | |||||||||
Expr1034873 | |||||||||
Expr1155119 | |||||||||
Expr2014109 | |||||||||
Expr2032348 | |||||||||
Drives_construct | WBCnstr00012778 | ||||||||
WBCnstr00013684 | |||||||||
WBCnstr00030935 | |||||||||
Construct_product | WBCnstr00030935 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (163) | |||||||||
SAGE_tag | SAGE:tggctactaa | Strand | Antisense | ||||||
SAGE:gattattcat | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction | WBInteraction000192780 | ||||||||
WBInteraction000226599 | |||||||||
WBInteraction000231492 | |||||||||
WBInteraction000272849 | |||||||||
WBInteraction000360272 | |||||||||
WBInteraction000363413 | |||||||||
WBInteraction000383455 | |||||||||
WBInteraction000386921 | |||||||||
WBInteraction000426767 | |||||||||
WBInteraction000444792 | |||||||||
Map_info | Map | V | Position | 3.62984 | Error | 0.001344 | |||
Positive | Positive_clone | R07B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034540 | ||||||||
WBPaper00036257 | |||||||||
WBPaper00039677 | |||||||||
WBPaper00060760 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |