WormBase Tree Display for Gene: WBGene00011036
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| WBGene00011036 | SMap | S_parent | Sequence | R05D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | edc-3 | Person_evidence | WBPerson1787 | |||||
| Sequence_name | R05D11.8 | ||||||||
| Molecular_name | R05D11.8 | ||||||||
| R05D11.8.1 | |||||||||
| CE06243 | |||||||||
| Other_name | CELE_R05D11.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | edc-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Apr 2005 11:05:24 | WBPerson2970 | Name_change | CGC_name | edc-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | edc | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00032010 | ||||||||
| WBStrain00051692 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072599 | ||||||||
| 00072600 | |||||||||
| 00072601 | |||||||||
| 00072602 | |||||||||
| 00072603 | |||||||||
| 00072604 | |||||||||
| 00072605 | |||||||||
| Contained_in_operon | CEOP1484 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in P-body assembly and deadenylation-independent decapping of nuclear-transcribed mRNA. Predicted to be located in P-body. Expressed in hypodermal cell; intestinal cell; neurons; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 50. Is an ortholog of human EDC3 (enhancer of mRNA decapping 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081213 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26114) | ||||
| Molecular_info | Corresponding_CDS | R05D11.8 | |||||||
| Corresponding_transcript | R05D11.8.1 | ||||||||
| Other_sequence | CRC04027_1 | ||||||||
| CBC06897_1 | |||||||||
| Associated_feature | WBsf656645 | ||||||||
| WBsf218176 | |||||||||
| WBsf218177 | |||||||||
| WBsf218178 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr14436 | ||||||||
| Expr14437 | |||||||||
| Expr1017112 | |||||||||
| Expr1034840 | |||||||||
| Expr1154974 | |||||||||
| Expr2011175 | |||||||||
| Expr2029411 | |||||||||
| Drives_construct | WBCnstr00030976 | ||||||||
| WBCnstr00040873 | |||||||||
| Construct_product | WBCnstr00030976 | ||||||||
| WBCnstr00040873 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (80) | |||||||||
| Map_info | Map | I | Position | 2.99017 | Error | 0.002944 | |||
| Positive | Positive_clone | R05D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5173 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026953 | ||||||||
| WBPaper00036306 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00048118 | |||||||||
| WBPaper00055343 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00062037 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
