WormBase Tree Display for Gene: WBGene00011011
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| WBGene00011011 | SMap | S_parent | Sequence | R04D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R04D3.3 | |||||||
| Molecular_name | R04D3.3 | ||||||||
| R04D3.3.1 | |||||||||
| CE06224 | |||||||||
| Other_name | CELE_R04D3.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R04D3.3 | ||||||||
| DB_info | Database | AceView | gene | XN908 | |||||
| WormQTL | gene | WBGene00011011 | |||||||
| WormFlux | gene | WBGene00011011 | |||||||
| NDB | locus_tag | CELE_R04D3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011011|UniProtKB=Q21713 | |||||||
| family | PTHR21449 | ||||||||
| NCBI | gene | 181453 | |||||||
| RefSeq | protein | NM_077809.7 | |||||||
| TREEFAM | TREEFAM_ID | TF320046 | |||||||
| TrEMBL | UniProtAcc | Q21713 | |||||||
| UniProt_GCRP | UniProtAcc | Q21713 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX120 | ||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00010066 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011010 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019735 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00013659 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00164968 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021656 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019989 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; hypodermis; neurons; and pharyngeal muscle cell based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by seventeen chemicals including methylmercury hydroxide; rotenone; and Alovudine based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R04D3.3 | |||||||
| Corresponding_transcript | R04D3.3.1 | ||||||||
| Associated_feature | WBsf238121 | ||||||||
| WBsf238122 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002110 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034581 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007592 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051237 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020214 | ||||||||
| Expr1034826 | |||||||||
| Expr1154940 | |||||||||
| Expr2005369 | |||||||||
| Expr2023590 | |||||||||
| Drives_construct | WBCnstr00030994 | ||||||||
| Construct_product | WBCnstr00030994 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (85) | |||||||||
| Map_info | Positive | Positive_clone | R04D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 11.1614 | |||||||
| Method | Gene |
