WormBase Tree Display for Gene: WBGene00010774
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WBGene00010774 | SMap | S_parent | Sequence | K11E4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | shc-3 | Person_evidence | WBPerson3668 | |||
Laboratory_evidence | LMN | ||||||
Sequence_name | K11E4.2 | ||||||
Molecular_name | K11E4.2a | ||||||
K11E4.2a.1 | |||||||
CE34056 | |||||||
K11E4.2b | |||||||
CE54562 | |||||||
K11E4.2b.1 | |||||||
Other_name | K11E4.2 | ||||||
CELE_K11E4.2 | Accession_evidence | NDB | BX284606 | ||||
Public_name | shc-3 | ||||||
DB_info | Database | AceView | gene | XO337 | |||
WormQTL | gene | WBGene00010774 | |||||
WormFlux | gene | WBGene00010774 | |||||
NDB | locus_tag | CELE_K11E4.2 | |||||
NCBI | gene | 187296 | |||||
RefSeq | protein | NM_077894.7 | |||||
NM_001420579.1 | |||||||
TrEMBL | UniProtAcc | Q21429 | |||||
A0A9J5HVD6 | |||||||
UniProt_GCRP | UniProtAcc | Q21429 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | shc | ||||||
Allele (40) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (16) | |||||||
Structured_description | Automated_description | Enriched in ABplapaaap; ABprapaaap; URX; dopaminergic neurons; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; elt-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including stavudine; Zidovudine; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SH2 domain superfamily and SH2 domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K11E4.2a | |||||
K11E4.2b | |||||||
Corresponding_CDS_history | K11E4.2:wp101 | ||||||
Corresponding_transcript | K11E4.2a.1 | ||||||
K11E4.2b.1 | |||||||
Associated_feature | WBsf648688 | ||||||
WBsf717393 | |||||||
WBsf236604 | |||||||
WBsf236605 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | X | Position | 14.4492 | |||
Positive | Positive_clone | K11E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00062854 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |