WormBase Tree Display for Gene: WBGene00010600
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| WBGene00010600 | SMap | S_parent | Sequence | K06B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-196 | Person_evidence | WBPerson600 | |||||
| Sequence_name | K06B4.5 | ||||||||
| Molecular_name | K06B4.5 | ||||||||
| K06B4.5.1 | |||||||||
| CE35583 | |||||||||
| Other_name | CELE_K06B4.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-196 | ||||||||
| DB_info | Database | AceView | gene | 5Q165 | |||||
| WormQTL | gene | WBGene00010600 | |||||||
| WormFlux | gene | WBGene00010600 | |||||||
| NDB | locus_tag | CELE_K06B4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010600|UniProtKB=O17932 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 187053 | |||||||
| RefSeq | protein | NM_074499.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322922 | |||||||
| TrEMBL | UniProtAcc | O17932 | |||||||
| UniProt_GCRP | UniProtAcc | O17932 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-196 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031083 | ||||||||
| 00031084 | |||||||||
| 00031085 | |||||||||
| 00117941 | |||||||||
| 00117942 | |||||||||
| 00117943 | |||||||||
| 00117944 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06B4.5 | |||||||
| Corresponding_CDS_history | K06B4.5:wp109 | ||||||||
| Corresponding_transcript | K06B4.5.1 | ||||||||
| Associated_feature | WBsf978562 | ||||||||
| WBsf1002333 | |||||||||
| WBsf1002334 | |||||||||
| WBsf1002335 | |||||||||
| WBsf1021049 | |||||||||
| WBsf1021050 | |||||||||
| WBsf1021051 | |||||||||
| Transcription_factor | WBTranscriptionFactor001034 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00107096 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034013 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050044 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7610 | ||||||||
| Expr1021682 | |||||||||
| Expr1153739 | |||||||||
| Expr2014098 | |||||||||
| Expr2032337 | |||||||||
| Drives_construct | WBCnstr00012755 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (32) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | V | Position | 8.62773 | Error | 0.004232 | |||
| Positive | Positive_clone | K06B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5314 | |||||||
| 5382 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062515 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
