WormBase Tree Display for Gene: WBGene00010581
expand all nodes | collapse all nodes | view schema
| WBGene00010581 | SMap | S_parent | Sequence | K05C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K05C4.4 | |||||||
| Molecular_name | K05C4.4 | ||||||||
| K05C4.4.1 | |||||||||
| CE53702 | |||||||||
| Other_name | CELE_K05C4.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | K05C4.4 | ||||||||
| DB_info | Database | AceView | gene | 1P325 | |||||
| WormQTL | gene | WBGene00010581 | |||||||
| WormFlux | gene | WBGene00010581 | |||||||
| NDB | locus_tag | CELE_K05C4.4 | |||||||
| NCBI | gene | 187019 | |||||||
| RefSeq | protein | NM_001375246.2 | |||||||
| TrEMBL | UniProtAcc | Q9XUU4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUU4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CSP29.g13443 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||||
| Csp5_scaffold_03311.g29765 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrI_pilon.g2953 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ABplppppaa; ABprppppaa; germ line; and germline precursor cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and elt-2 based on microarray and RNA-seq studies. Is affected by seven chemicals including stavudine; antimycin; and Ag nanoparticles based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K05C4.4 | |||||||
| Corresponding_CDS_history | K05C4.4:wp273 | ||||||||
| Corresponding_transcript | K05C4.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00033983 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003929 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061637 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049975 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087789 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023174 | ||||||||
| Expr1034620 | |||||||||
| Expr1153670 | |||||||||
| Expr2004787 | |||||||||
| Expr2023010 | |||||||||
| Drives_construct | WBCnstr00031308 | ||||||||
| Construct_product | WBCnstr00031308 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction | WBInteraction000182540 | ||||||||
| WBInteraction000517915 | |||||||||
| Map_info | Positive | Positive_clone | K05C4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 26.5581 | |||||||
| Reference | WBPaper00035157 | ||||||||
| Method | Gene |
