WormBase Tree Display for Gene: WBGene00010569
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WBGene00010569 | SMap | S_parent | Sequence | K04G2 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | scbp-2 | Person_evidence | WBPerson5890 | |||
Sequence_name | K04G2.11 | ||||||
Molecular_name | K04G2.11 | ||||||
K04G2.11.1 | |||||||
CE49894 | |||||||
Other_name | CELE_K04G2.11 | Accession_evidence | NDB | BX284601 | |||
Public_name | scbp-2 | ||||||
DB_info | Database | AceView | gene | 1I616 | |||
WormQTL | gene | WBGene00010569 | |||||
WormFlux | gene | WBGene00010569 | |||||
NDB | locus_tag | CELE_K04G2.11 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010569|UniProtKB=Q95ZR7 | |||||
family | PTHR13284 | ||||||
NCBI | gene | 172588 | |||||
RefSeq | protein | NM_001383434.1 | |||||
TrEMBL | UniProtAcc | Q95ZR7 | |||||
UniProt_GCRP | UniProtAcc | Q95ZR7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | scbp | ||||||
Allele (15) | |||||||
Strain | WBStrain00051069 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00085683 | ||||||
Contained_in_operon | CEOP1449 | ||||||
Ortholog (14) | |||||||
Structured_description | Concise_description | scbp-2 gene encodes the C. elegans SECIS-binding protein 2; SCBP-2 binds selenoproteins mRNA allowing selenocysteine (Sec) to be incorporated to the growing polypeptide chain instead of ending the protein translation; strains carrying scbp-2 mutations are unable to incorporate Sec; SCBP-2 contains an L7Ae domain; SCBP-2 translation initiates at a non-AUG codon. | Paper_evidence | WBPaper00045270 | |||
Person_evidence | WBPerson13381 | ||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 13 Jan 2016 00:00:00 | ||||||
Automated_description | Predicted to be located in ribosome. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00003919 | Inferred_automatically | RNAi_primary | |||
WBRNAi00049934 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1021165 | ||||||
Expr1153638 | |||||||
Expr2015620 | |||||||
Expr2033855 | |||||||
Drives_construct | WBCnstr00031317 | ||||||
Construct_product | WBCnstr00031317 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (106) | |||||||
Map_info | Map | I | Position | 2.43249 | |||
Positive | Positive_clone | K04G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00039799 | ||||||
WBPaper00042661 | |||||||
WBPaper00045270 | |||||||
WBPaper00045355 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |