WormBase Tree Display for Gene: WBGene00010334
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WBGene00010334 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | del-5 | Person_evidence | WBPerson260 | |||
WBPerson145 | |||||||
Sequence_name | F59F3.4 | ||||||
Molecular_name | F59F3.4 | ||||||
F59F3.4.1 | |||||||
CE31550 | |||||||
Other_name | CELE_F59F3.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | del-5 | ||||||
DB_info | Database | AceView | gene | XL622 | |||
WormQTL | gene | WBGene00010334 | |||||
WormFlux | gene | WBGene00010334 | |||||
NDB | locus_tag | CELE_F59F3.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010334|UniProtKB=G5EFH3 | |||||
family | PTHR11690 | ||||||
NCBI | gene | 186631 | |||||
RefSeq | protein | NM_077437.5 | |||||
TREEFAM | TREEFAM_ID | TF320082 | |||||
TrEMBL | UniProtAcc | G5EFH3 | |||||
UniProt_GCRP | UniProtAcc | G5EFH3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | del | ||||||
Allele (42) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (24) | |||||||
Paralog (30) | |||||||
Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F59F3.4 | |||||
Corresponding_CDS_history | F59F3.4:wp83 | ||||||
Corresponding_transcript | F59F3.4.1 | ||||||
Associated_feature | WBsf654381 | ||||||
WBsf671010 | |||||||
WBsf237928 | |||||||
WBsf237929 | |||||||
Experimental_info | RNAi_result | WBRNAi00016131 | Inferred_automatically | RNAi_primary | |||
WBRNAi00033219 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049215 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015929 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048923 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00091095 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr16223 | ||||||
Expr16225 | |||||||
Expr1016641 | |||||||
Expr1152959 | |||||||
Expr2010851 | |||||||
Expr2029089 | |||||||
Drives_construct | WBCnstr00031494 | ||||||
WBCnstr00042833 | |||||||
WBCnstr00042835 | |||||||
Construct_product | WBCnstr00031494 | ||||||
WBCnstr00042835 | |||||||
Microarray_results (21) | |||||||
Expression_cluster (141) | |||||||
Interaction (2) | |||||||
Map_info | Map | X | Position | 2.8439 | |||
Positive | Positive_clone | F59F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064140 | ||||||
WBPaper00064563 | |||||||
WBPaper00065080 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |