WormBase Tree Display for Gene: WBGene00010272
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WBGene00010272 | SMap | S_parent | Sequence | F58G6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | amph-1 | Person_evidence | WBPerson217 | |||
Sequence_name | F58G6.1 | ||||||
Molecular_name | F58G6.1 | ||||||
F58G6.1.1 | |||||||
CE03428 | |||||||
F58G6.1.2 | |||||||
Other_name | CELE_F58G6.1 | Accession_evidence | NDB | BX284604 | |||
Public_name | amph-1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | amph | ||||||
Allele (61) | |||||||
Strain | WBStrain00033163 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (43) | |||||||
Structured_description | Automated_description | Predicted to enable phospholipid binding activity. Involved in lipid tube assembly involved in organelle fission; nucleus localization; and nucleus organization. Located in nuclear envelope; perinuclear region of cytoplasm; and recycling endosome. Expressed in several structures, including coelomocyte; gonadal sheath cell; hypodermis; intestinal cell; and pharynx. Human ortholog(s) of this gene implicated in breast carcinoma; centronuclear myopathy 2; and prostate adenocarcinoma. Is an ortholog of human BIN1 (bridging integrator 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111220 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1052) | ||
DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1052) | ||||
DOID:2526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1052) | ||||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00106485 | Inferred_automatically | RNAi_primary | |||
WBRNAi00016018 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00114392 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098502 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065623 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033134 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049056 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00084418 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr6257 | ||||||
Expr8854 | |||||||
Expr8855 | |||||||
Expr12540 | |||||||
Expr1018776 | |||||||
Expr1034481 | |||||||
Expr1152797 | |||||||
Expr2009324 | |||||||
Expr2027560 | |||||||
Drives_construct | WBCnstr00002089 | ||||||
WBCnstr00013564 | |||||||
WBCnstr00031539 | |||||||
Construct_product | WBCnstr00005951 | ||||||
WBCnstr00013564 | |||||||
WBCnstr00021614 | |||||||
WBCnstr00031539 | |||||||
Antibody | WBAntibody00002062 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (119) | |||||||
Interaction (78) | |||||||
Map_info | Map | IV | Position | 4.34538 | Error | 0.000519 | |
Positive | Positive_clone | F58G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00035466 | ||||||
WBPaper00036494 | |||||||
WBPaper00038491 | |||||||
WBPaper00042727 | |||||||
WBPaper00048576 | |||||||
WBPaper00048715 | |||||||
WBPaper00051840 | |||||||
WBPaper00055090 | |||||||
WBPaper00061063 | |||||||
WBPaper00064699 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |