WormBase Tree Display for Gene: WBGene00010232
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WBGene00010232 | SMap | S_parent | Sequence | F58B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F58B3.6 | |||||||
Molecular_name | F58B3.6 | ||||||||
F58B3.6.1 | |||||||||
CE41417 | |||||||||
Other_name | CELE_F58B3.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F58B3.6 | ||||||||
DB_info | Database | AceView | gene | 4M401 | |||||
WormQTL | gene | WBGene00010232 | |||||||
WormFlux | gene | WBGene00010232 | |||||||
NDB | locus_tag | CELE_F58B3.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010232|UniProtKB=Q20965 | |||||||
family | PTHR12354 | ||||||||
NCBI | gene | 178090 | |||||||
RefSeq | protein | NM_069796.7 | |||||||
TREEFAM | TREEFAM_ID | TF313638 | |||||||
TrEMBL | UniProtAcc | Q20965 | |||||||
UniProt_GCRP | UniProtAcc | Q20965 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP4464 | ||||||||
Ortholog (43) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including AFD; VB neuron; dopaminergic neurons; germ line; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including hsf-1; lin-4; and lin-14 based on microarray; RNA-seq; and proteomic studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Human IFRD2 enables ribosome binding activity and translation repressor activity. Is predicted to encode a protein with the following domains: Armadillo-type fold; Interferon-related developmental regulator, C-terminal; Interferon-related developmental regulator (IFRD); Interferon-related developmental regulator; Interferon-related protein conserved region; Interferon-related developmental regulator, N-terminal; and Phosphorylation site. Is an ortholog of human IFRD2 (interferon related developmental regulator 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F58B3.6 | |||||||
Corresponding_CDS_history | F58B3.6:wp179 | ||||||||
Corresponding_transcript | F58B3.6.1 | ||||||||
Other_sequence | CRC10990_1 | ||||||||
FK808116.1 | |||||||||
CR10813 | |||||||||
CJC02625_1 | |||||||||
CR05007 | |||||||||
FK806097.1 | |||||||||
CRC03082_1 | |||||||||
CBC01563_1 | |||||||||
Associated_feature | WBsf646397 | ||||||||
WBsf646398 | |||||||||
WBsf655056 | |||||||||
WBsf660745 | |||||||||
WBsf660746 | |||||||||
WBsf229181 | |||||||||
Experimental_info | RNAi_result | WBRNAi00048952 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094216 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103401 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033074 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015943 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001549 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062283 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028939 | ||||||||
Expr1034463 | |||||||||
Expr1152689 | |||||||||
Expr2004374 | |||||||||
Expr2022598 | |||||||||
Drives_construct | WBCnstr00031567 | ||||||||
Construct_product | WBCnstr00031567 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (108) | |||||||||
Interaction | WBInteraction000223975 | ||||||||
WBInteraction000231730 | |||||||||
WBInteraction000361545 | |||||||||
WBInteraction000430999 | |||||||||
Map_info | Positive | Positive_clone | F58B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 5.09543 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |