WormBase Tree Display for Gene: WBGene00010230
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WBGene00010230 | SMap | S_parent | Sequence | F58A4 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | rpac | |||||
Allele | WBVar01500260 | |||||
WBVar00405717 | ||||||
WBVar01499774 | ||||||
WBVar01723199 | ||||||
WBVar01332159 | ||||||
WBVar00092985 | ||||||
WBVar00851574 | ||||||
WBVar00851575 | ||||||
WBVar01645909 | ||||||
Strain | WBStrain00036516 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (11) | ||||||
Contained_in_operon | CEOP3608 | |||||
Ortholog (29) | ||||||
Paralog | WBGene00012187 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable protein dimerization activity. Predicted to contribute to RNA polymerase I activity and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I and transcription by RNA polymerase III. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex and RNA polymerase III complex. Used to study obesity. Human ortholog(s) of this gene implicated in Treacher Collins syndrome 2. Is an ortholog of human POLR1D (RNA polymerase I and III subunit D). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Experimental_model | DOID:9970 | Homo sapiens | Paper_evidence | WBPaper00061889 | |
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 28 Jun 2022 00:00:00 | |||||
Potential_model | DOID:0080790 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20422) | ||
Models_disease_in_annotation | WBDOannot00001261 | |||||
Molecular_info | Corresponding_CDS | F58A4.9 | ||||
Corresponding_transcript | F58A4.9.1 | |||||
Other_sequence (27) | ||||||
Associated_feature | WBsf651391 | |||||
WBsf993736 | ||||||
Experimental_info | RNAi_result (26) | |||||
Expr_pattern | Expr1014907 | |||||
Expr1034461 | ||||||
Expr1152674 | ||||||
Expr2015417 | ||||||
Expr2033652 | ||||||
Drives_construct | WBCnstr00031569 | |||||
Construct_product | WBCnstr00031569 | |||||
Microarray_results (19) | ||||||
Expression_cluster (134) | ||||||
Interaction (186) | ||||||
Map_info | Map | III | Position | 0.819375 | ||
Positive | Positive_clone | F58A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00049828 | ||||||
WBPaper00055090 | ||||||
WBPaper00061889 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |