WormBase Tree Display for Gene: WBGene00010137
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| WBGene00010137 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ztf-26 | Person_evidence | WBPerson1997 | |||||
| Sequence_name | F55H12.6 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_F55H12.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ztf-26 | ||||||||
| DB_info | Database | AceView | gene | 1J430 | |||||
| WormQTL | gene | WBGene00010137 | |||||||
| WormFlux | gene | WBGene00010137 | |||||||
| NDB | locus_tag | CELE_F55H12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010137|UniProtKB=G5ECP6 | |||||||
| family | PTHR24408 | ||||||||
| NCBI | gene | 172699 | |||||||
| RefSeq | protein | NM_001373222.3 | |||||||
| NM_001026331.4 | |||||||||
| NM_001026332.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF352381 | |||||||
| TrEMBL | UniProtAcc | G5ECP6 | |||||||
| Q19902 | |||||||||
| A5JYU2 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ECP6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Apr 2008 09:32:24 | WBPerson2970 | Name_change | CGC_name | ztf-26 | ||||
| 3 | 10 Jun 2014 12:12:12 | WBPerson1983 | Event | Acquires_merge | WBGene00009253 | ||||
| Acquires_merge | WBGene00009253 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ztf | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004733 | ||||||||
| 00004734 | |||||||||
| 00004735 | |||||||||
| 00004736 | |||||||||
| 00004737 | |||||||||
| 00066271 | |||||||||
| 00117610 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Expressed in head muscle; head neurons; hypodermis; nerve ring neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55H12.6a | |||||||
| F55H12.6b | |||||||||
| F55H12.6c | |||||||||
| Corresponding_CDS_history | F55H12.6:wp128 | ||||||||
| Corresponding_transcript | F55H12.6a.1 | ||||||||
| F55H12.6b.1 | |||||||||
| F55H12.6c.1 | |||||||||
| F55H12.6c.2 | |||||||||
| F55H12.6c.3 | |||||||||
| Other_sequence | MC02327 | ||||||||
| Associated_feature (11) | |||||||||
| Transcription_factor | WBTranscriptionFactor000826 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00045925 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031578 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9836 | ||||||||
| Expr9838 | |||||||||
| Expr9844 | |||||||||
| Expr1022946 | |||||||||
| Expr1152351 | |||||||||
| Expr2018197 | |||||||||
| Expr2036334 | |||||||||
| Drives_construct | WBCnstr00014356 | ||||||||
| WBCnstr00014358 | |||||||||
| WBCnstr00014364 | |||||||||
| WBCnstr00031638 | |||||||||
| Construct_product | WBCnstr00021792 | ||||||||
| WBCnstr00031638 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Map | I | Position | 3.24287 | Error | 0.00559 | |||
| Positive | Positive_clone | F55H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||||
| Method | Gene |
