WormBase Tree Display for Gene: WBGene00010085
expand all nodes | collapse all nodes | view schema
| WBGene00010085 | SMap | S_parent | Sequence | F55B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55B11.3 | |||||||
| Molecular_name | F55B11.3 | ||||||||
| F55B11.3.1 | |||||||||
| CE36167 | |||||||||
| Other_name | CELE_F55B11.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F55B11.3 | ||||||||
| DB_info | Database | AceView | gene | 4P189 | |||||
| WormQTL | gene | WBGene00010085 | |||||||
| WormFlux | gene | WBGene00010085 | |||||||
| NDB | locus_tag | CELE_F55B11.3 | |||||||
| NCBI | gene | 178383 | |||||||
| RefSeq | protein | NM_070348.9 | |||||||
| TREEFAM | TREEFAM_ID | TF322824 | |||||||
| TrEMBL | UniProtAcc | O17893 | |||||||
| UniProt_GCRP | UniProtAcc | O17893 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| Strain | WBStrain00003670 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00066800 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| WBGene00075195 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00066799 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00164486 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00085863 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| chrIV_pilon.g12476 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00010087 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in anterior spermatheca; dopaminergic neurons; germ line; and posterior spermatheca based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq; microarray; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55B11.3 | |||||||
| Corresponding_CDS_history | F55B11.3:wp92 | ||||||||
| F55B11.3:wp114 | |||||||||
| Corresponding_transcript | F55B11.3.1 | ||||||||
| Associated_feature | WBsf1018651 | ||||||||
| WBsf229501 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032850 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Chronogram695 | ||||||||
| Chronogram1120 | |||||||||
| Expr6198 | |||||||||
| Expr1028630 | |||||||||
| Expr1152232 | |||||||||
| Expr2004206 | |||||||||
| Expr2022426 | |||||||||
| Drives_construct | WBCnstr00004069 | ||||||||
| WBCnstr00004106 | |||||||||
| WBCnstr00006707 | |||||||||
| WBCnstr00031680 | |||||||||
| Construct_product | WBCnstr00031680 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (200) | |||||||||
| Interaction | WBInteraction000218326 | ||||||||
| WBInteraction000263116 | |||||||||
| WBInteraction000286079 | |||||||||
| WBInteraction000426508 | |||||||||
| WBInteraction000551024 | |||||||||
| WBInteraction000552806 | |||||||||
| WBInteraction000563867 | |||||||||
| WBInteraction000580687 | |||||||||
| WBInteraction000586070 | |||||||||
| Map_info | Positive | Positive_clone | F55B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 11.8942 | |||||||
| Method | Gene |
