WormBase Tree Display for Gene: WBGene00010083
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| WBGene00010083 | SMap | S_parent | Sequence | F55B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | xdh-1 | Person_evidence | WBPerson1185 | |||||
| Sequence_name | F55B11.1 | ||||||||
| Molecular_name | F55B11.1 | ||||||||
| F55B11.1.1 | |||||||||
| CE16116 | |||||||||
| Other_name | CELE_F55B11.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | xdh-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Feb 2017 15:37:28 | WBPerson2970 | Name_change | CGC_name | xhd-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | xdh | ||||||||
| Allele (156) | |||||||||
| Strain | WBStrain00033054 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (71) | |||||||||
| Paralog | WBGene00015057 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017487 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The F55B11.1 gene encodes an ortholog of the human gene XANTHINE DEHYDROGENASE (XDH), which when mutated leads to xanthinuria (OMIM:278300). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in peroxisome. Expressed in excretory cell and head neurons. Human ortholog(s) of this gene implicated in several diseases, including Lesch-Nyhan syndrome; artery disease (multiple); and xanthinuria type I. Is an ortholog of human XDH (xanthine dehydrogenase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (11) | ||||||||
| Molecular_info | Corresponding_CDS | F55B11.1 | |||||||
| Corresponding_transcript | F55B11.1.1 | ||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf015685 | ||||||||
| WBsf231193 | |||||||||
| WBsf231194 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015689 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048444 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14958 | ||||||||
| Expr14959 | |||||||||
| Expr1018920 | |||||||||
| Expr1034402 | |||||||||
| Expr1152230 | |||||||||
| Expr2018096 | |||||||||
| Expr2036234 | |||||||||
| Drives_construct | WBCnstr00041818 | ||||||||
| WBCnstr00041819 | |||||||||
| Construct_product | WBCnstr00041818 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (183) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Map | IV | Position | 11.8659 | |||||
| Positive | Positive_clone | F55B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033003 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051791 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057424 | |||||||||
| WBPaper00059258 | |||||||||
| WBPaper00063683 | |||||||||
| WBPaper00063944 | |||||||||
| WBPaper00065382 | |||||||||
| WBPaper00065658 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
