WormBase Tree Display for Gene: WBGene00010059
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| WBGene00010059 | SMap | S_parent | Sequence | F54E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F54E4.3 | |||||||
| Molecular_name | F54E4.3 | ||||||||
| F54E4.3.1 | |||||||||
| CE45002 | |||||||||
| Other_name | rip-1 | Person_evidence | WBPerson508 | ||||||
| CELE_F54E4.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | F54E4.3 | ||||||||
| DB_info | Database | AceView | gene | XP252 | |||||
| WormQTL | gene | WBGene00010059 | |||||||
| WormFlux | gene | WBGene00010059 | |||||||
| NDB | locus_tag | CELE_F54E4.3 | |||||||
| NCBI | gene | 181559 | |||||||
| RefSeq | protein | NM_078032.7 | |||||||
| TrEMBL | UniProtAcc | Q93786 | |||||||
| UniProt_GCRP | UniProtAcc | Q93786 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Apr 2017 12:15:23 | WBPerson2970 | Name_change | Other_name | rip-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (79) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppppapa; head mesodermal cell; neuronal sheath cell; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on RNA-seq; microarray; and proteomic studies. Is affected by fourteen chemicals including aldicarb; iron oxide nanoparticle; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54E4.3 | |||||||
| Corresponding_CDS_history | F54E4.3:wp163 | ||||||||
| F54E4.3:wp211 | |||||||||
| F54E4.3:wp214 | |||||||||
| Corresponding_transcript | F54E4.3.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf654586 | ||||||||
| WBsf654587 | |||||||||
| WBsf671280 | |||||||||
| WBsf671281 | |||||||||
| WBsf671282 | |||||||||
| WBsf1007962 | |||||||||
| WBsf1007963 | |||||||||
| WBsf1024433 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032804 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022553 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048345 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015637 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000713 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011152 | ||||||||
| Expr1034389 | |||||||||
| Expr1152142 | |||||||||
| Expr2004166 | |||||||||
| Expr2022388 | |||||||||
| Drives_construct | WBCnstr00031701 | ||||||||
| Construct_product | WBCnstr00031701 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (218) | |||||||||
| Interaction | WBInteraction000145146 | ||||||||
| WBInteraction000404201 | |||||||||
| WBInteraction000439163 | |||||||||
| WBInteraction000448602 | |||||||||
| Map_info | Positive | Positive_clone | F54E4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 19.6318 | |||||||
| Reference | WBPaper00052816 | ||||||||
| WBPaper00061346 | |||||||||
| Method | Gene |
