WormBase Tree Display for Gene: WBGene00010020
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| WBGene00010020 | SMap | S_parent | Sequence | F54B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srbc-48 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F54B8.6 | ||||||||
| Molecular_name | F54B8.6 | ||||||||
| F54B8.6.1 | |||||||||
| CE16108 | |||||||||
| Other_name | CELE_F54B8.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srbc-48 | ||||||||
| DB_info | Database | AceView | gene | 5Q299 | |||||
| WormQTL | gene | WBGene00010020 | |||||||
| WormFlux | gene | WBGene00010020 | |||||||
| NDB | locus_tag | CELE_F54B8.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010020|UniProtKB=O45559 | |||||||
| family | PTHR46418 | ||||||||
| NCBI | gene | 186203 | |||||||
| RefSeq | protein | NM_074550.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315371 | |||||||
| TrEMBL | UniProtAcc | O45559 | |||||||
| UniProt_GCRP | UniProtAcc | O45559 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Feb 2005 11:21:21 | WBPerson2970 | Name_change | CGC_name | srbc-48 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srbc | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034784 | ||||||||
| Ortholog (16) | |||||||||
| Paralog (123) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in AWCL; AWCR; and head neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54B8.6 | |||||||
| Corresponding_transcript | F54B8.6.1 | ||||||||
| Associated_feature | WBsf662136 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00048239 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr15087 | ||||||||
| Expr1018088 | |||||||||
| Expr1152045 | |||||||||
| Expr2016201 | |||||||||
| Expr2034433 | |||||||||
| Drives_construct | WBCnstr00031734 | ||||||||
| WBCnstr00042692 | |||||||||
| Construct_product | WBCnstr00031734 | ||||||||
| WBCnstr00041998 | |||||||||
| WBCnstr00042692 | |||||||||
| WBCnstr00042693 | |||||||||
| Regulate_expr_cluster | WBPaper00059664:srbc-48(ac23)_downregulated | ||||||||
| WBPaper00059664:srbc-48(ac23)_upregulated | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (14) | |||||||||
| SAGE_tag | SAGE:aattcacagt | Strand | Antisense | ||||||
| SAGE:aattcacagtgcacttg | Strand | Antisense | |||||||
| Interaction (22) | |||||||||
| Map_info | Map | V | Position | 8.9648 | Error | 0.000542 | |||
| Positive | Positive_clone | F54B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00058469 | ||||||||
| WBPaper00059664 | |||||||||
| WBPaper00062456 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
