WormBase Tree Display for Gene: WBGene00010013
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| WBGene00010013 | SMap | S_parent | Sequence | F54B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54B3.1 | |||||||
| Molecular_name | F54B3.1a | ||||||||
| F54B3.1a.1 | |||||||||
| CE43308 | |||||||||
| F54B3.1b | |||||||||
| CE43180 | |||||||||
| F54B3.1b.1 | |||||||||
| Other_name | CELE_F54B3.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54B3.1 | ||||||||
| DB_info | Database | AceView | gene | 2K557 | |||||
| WormQTL | gene | WBGene00010013 | |||||||
| WormFlux | gene | WBGene00010013 | |||||||
| NDB | locus_tag | CELE_F54B3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010013|UniProtKB=O62263 | |||||||
| family | PTHR14918 | ||||||||
| NCBI | gene | 174591 | |||||||
| RefSeq | protein | NM_063810.5 | |||||||
| NM_001129142.5 | |||||||||
| TrEMBL | UniProtAcc | A5Z2S3 | |||||||
| O62263 | |||||||||
| UniProt_GCRP | UniProtAcc | O62263 | |||||||
| OMIM | gene | 615463 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (236) | |||||||||
| Strain | WBStrain00032137 | ||||||||
| WBStrain00032138 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004952 | ||||||||
| 00117517 | |||||||||
| Contained_in_operon | CEOP2714 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 18. Is an ortholog of human SZT2 (SZT2 subunit of KICSTOR complex). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080413 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29040) | ||||
| Molecular_info | Corresponding_CDS | F54B3.1a | |||||||
| F54B3.1b | |||||||||
| Corresponding_CDS_history | F54B3.1a:wp196 | ||||||||
| F54B3.1b:wp196 | |||||||||
| Corresponding_transcript | F54B3.1a.1 | ||||||||
| F54B3.1b.1 | |||||||||
| Other_sequence | JI480891.1 | ||||||||
| JI167087.1 | |||||||||
| JI163871.1 | |||||||||
| JI163901.1 | |||||||||
| MH03115 | |||||||||
| Associated_feature | WBsf644598 | ||||||||
| WBsf658133 | |||||||||
| WBsf658134 | |||||||||
| WBsf658135 | |||||||||
| WBsf658136 | |||||||||
| WBsf658137 | |||||||||
| WBsf221990 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048228 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002174 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015573 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020479 | ||||||||
| Expr1034365 | |||||||||
| Expr1152033 | |||||||||
| Expr2004113 | |||||||||
| Expr2022337 | |||||||||
| Drives_construct | WBCnstr00031741 | ||||||||
| Construct_product | WBCnstr00031741 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction | WBInteraction000247571 | ||||||||
| WBInteraction000296953 | |||||||||
| WBInteraction000307589 | |||||||||
| WBInteraction000352622 | |||||||||
| WBInteraction000356994 | |||||||||
| WBInteraction000377519 | |||||||||
| WBInteraction000404108 | |||||||||
| WBInteraction000460744 | |||||||||
| WBInteraction000539389 | |||||||||
| WBInteraction000575377 | |||||||||
| Map_info | Positive | Positive_clone | F54B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 2.34737 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
