WormBase Tree Display for Gene: WBGene00009973
expand all nodes | collapse all nodes | view schema
WBGene00009973 | SMap | S_parent | Sequence | F53C11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | decr-1.1 | Person_evidence | WBPerson261 | |||
WBPerson21017 | |||||||
Curator_confirmed | WBPerson555 | ||||||
Sequence_name | F53C11.3 | ||||||
Molecular_name | F53C11.3 | ||||||
F53C11.3.1 | |||||||
CE10908 | |||||||
Other_name | CELE_F53C11.3 | Accession_evidence | NDB | BX284605 | |||
Public_name | decr-1.1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | decr | ||||||
Allele (32) | |||||||
Strain | WBStrain00003032 | ||||||
WBStrain00037760 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00086558 | ||||||
00086559 | |||||||
00086560 | |||||||
00086561 | |||||||
00086562 | |||||||
00086563 | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00011467 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00012177 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable 2,4-dienoyl-CoA reductase (NADPH) activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in mitochondrion. Is an ortholog of human DECR1 (2,4-dienoyl-CoA reductase 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F53C11.3 | |||||
Corresponding_transcript | F53C11.3.1 | ||||||
Other_sequence (52) | |||||||
Associated_feature | WBsf647484 | ||||||
WBsf232826 | |||||||
Experimental_info | RNAi_result | WBRNAi00065103 | Inferred_automatically | RNAi_primary | |||
WBRNAi00048101 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032682 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00102263 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015489 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (9) | |||||||
Drives_construct | WBCnstr00003532 | ||||||
WBCnstr00031774 | |||||||
Construct_product | WBCnstr00031774 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (195) | |||||||
Interaction (78) | |||||||
Map_info | Map | V | Position | 5.5873 | |||
Positive | Positive_clone | F53C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028482 | ||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00065140 | |||||||
Remark | Note that CGC_name decr-1.1 was previously incorrectly associated with F43C11.3 | Person_evidence | WBPerson21017 | ||||
Curator_confirmed | WBPerson555 | ||||||
WBPerson51134 | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |