WormBase Tree Display for Gene: WBGene00009866
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| WBGene00009866 | SMap | S_parent | Sequence | F49C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49C5.3 | |||||||
| Molecular_name | F49C5.3 | ||||||||
| F49C5.3.1 | |||||||||
| CE37917 | |||||||||
| Other_name | CELE_F49C5.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F49C5.3 | ||||||||
| DB_info | Database | AceView | gene | 2M825 | |||||
| WormQTL | gene | WBGene00009866 | |||||||
| WormFlux | gene | WBGene00009866 | |||||||
| NDB | locus_tag | CELE_F49C5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009866|UniProtKB=O17878 | |||||||
| family | PTHR47645 | ||||||||
| NCBI | gene | 186014 | |||||||
| RefSeq | protein | NM_064277.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322265 | |||||||
| TrEMBL | UniProtAcc | O17878 | |||||||
| UniProt_GCRP | UniProtAcc | O17878 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00010859 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019011 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011710 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022016 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012969 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019133 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00019589 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004745 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00271744 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ALML; ALMR; BDUL; BDUR; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by hydrogen sulfide and Ag nanoparticles based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49C5.3 | |||||||
| Corresponding_CDS_history | F49C5.3:wp137 | ||||||||
| Corresponding_transcript | F49C5.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047816 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021209 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022485 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006219 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047813 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015294 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006220 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047814 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047815 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022903 | ||||||||
| Expr1151650 | |||||||||
| Expr2003923 | |||||||||
| Expr2022145 | |||||||||
| Drives_construct | WBCnstr00031862 | ||||||||
| Construct_product | WBCnstr00031862 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (28) | |||||||||
| Map_info | Positive | Positive_clone | F49C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 10.2962 | |||||||
| Method | Gene |
