WormBase Tree Display for Gene: WBGene00009827

WBGene00009827 SMap: S_parent: Sequence: F47G4
  Identity: Version: 2
    Name: CGC_name: hmg-6 Person_evidence: WBPerson1997
      Sequence_name: F47G4.6
      Molecular_name: F47G4.6
        F47G4.6.1
        CE34189
      Other_name: CELE_F47G4.6 Accession_evidence: NDB BX284601
      Public_name: hmg-6
    DB_info: Database: AceView gene 1O651
        WormQTL gene WBGene00009827
        WormFlux gene WBGene00009827
        NDB locus_tag CELE_F47G4.6
        NCBI gene 185946
        RefSeq protein NM_061050.4
        TrEMBL UniProtAcc Q9XTS5
        UniProt_GCRP UniProtAcc Q9XTS5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Sep 2011 11:35:55 WBPerson2970 Name_change: CGC_name: hmg-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hmg
    Allele (34)
    Strain: WBStrain00033088
      WBStrain00037012
    RNASeq_FPKM (74)
    GO_annotation: 00101102
      00101103
      00101104
      00101105
      00101106
    Ortholog (21)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be located in nucleus. Expressed in amphid neurons; head neurons; phasmid neurons; and tail neurons. Is an ortholog of human TOX4 (TOX high mobility group box family member 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F47G4.6
    Corresponding_CDS_history: F47G4.6:wp101
    Corresponding_transcript: F47G4.6.1
    Associated_feature: WBsf978403
      WBsf986019
      WBsf986020
      WBsf986021
      WBsf1011162
      WBsf218768
    Transcription_factor: WBTranscriptionFactor001015
  Experimental_info: RNAi_result: WBRNAi00092052 Inferred_automatically: RNAi_primary
      WBRNAi00047684 Inferred_automatically: RNAi_primary
      WBRNAi00003701 Inferred_automatically: RNAi_primary
      WBRNAi00032453 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3947
      Expr7573
      Expr1027118
      Expr1034294
      Expr1151525
      Expr1200180
      Expr2012523
      Expr2030762
    Drives_construct: WBCnstr00011771
      WBCnstr00012718
      WBCnstr00031888
    Construct_product: WBCnstr00021735
      WBCnstr00031888
    Microarray_results (18)
    Expression_cluster (105)
    Interaction: WBInteraction000203470
      WBInteraction000225790
      WBInteraction000233072
      WBInteraction000288043
      WBInteraction000505235
      WBInteraction000519932
  Map_info: Map: I Position: 22.9899 Error: 0.011076
    Positive: Positive_clone: F47G4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene