WormBase Tree Display for Gene: WBGene00009758
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| WBGene00009758 | SMap | S_parent | Sequence | F46B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-11 | |||||||
| Sequence_name | F46B3.3 | ||||||||
| Molecular_name | F46B3.3a | ||||||||
| F46B3.3a.1 | |||||||||
| CE43938 | |||||||||
| F46B3.3b | |||||||||
| CE47749 | |||||||||
| F46B3.3c | |||||||||
| CE47768 | |||||||||
| F46B3.3b.1 | |||||||||
| F46B3.3c.1 | |||||||||
| Other_name | CELE_F46B3.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-11 | ||||||||
| DB_info | Database | AceView | gene | 5V73 | |||||
| WormQTL | gene | WBGene00009758 | |||||||
| WormFlux | gene | WBGene00009758 | |||||||
| NDB | locus_tag | CELE_F46B3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009758|UniProtKB=J7SF92 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 185831 | |||||||
| RefSeq | protein | NM_075574.4 | |||||||
| NM_001277019.3 | |||||||||
| NM_001277020.2 | |||||||||
| TrEMBL | UniProtAcc | J7SF92 | |||||||
| Q9XV15 | |||||||||
| J7SA59 | |||||||||
| UniProt_GCRP | UniProtAcc | J7SF92 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (85) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024012 | ||||||||
| 00117368 | |||||||||
| Ortholog (13) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. Expressed in DVA; HSNL; HSNR; excretory gland cell; and hyp10. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F46B3.3a | |||||||
| F46B3.3b | |||||||||
| F46B3.3c | |||||||||
| Corresponding_CDS_history | F46B3.3:wp182 | ||||||||
| F46B3.3:wp204 | |||||||||
| Corresponding_transcript | F46B3.3a.1 | ||||||||
| F46B3.3b.1 | |||||||||
| F46B3.3c.1 | |||||||||
| Associated_feature | WBsf647749 | ||||||||
| WBsf1003594 | |||||||||
| WBsf1021980 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047484 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015059 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13849 | ||||||||
| Expr1023274 | |||||||||
| Expr1151321 | |||||||||
| Expr2017576 | |||||||||
| Expr2035715 | |||||||||
| Drives_construct | WBCnstr00031945 | ||||||||
| WBCnstr00040207 | |||||||||
| Construct_product | WBCnstr00031945 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (53) | |||||||||
| Interaction | WBInteraction000558375 | ||||||||
| WBInteraction000558376 | |||||||||
| Map_info | Map | V | Position | 25.0187 | Error | 0.000907 | |||
| Positive | Positive_clone | F46B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034265 | ||||||||
| WBPaper00036939 | |||||||||
| WBPaper00055000 | |||||||||
| WBPaper00058439 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
