WormBase Tree Display for Gene: WBGene00009744
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WBGene00009744 | SMap | S_parent | Sequence | F45H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | hpo-35 | Paper_evidence | WBPaper00038231 | |||||
Person_evidence | WBPerson26 | ||||||||
Sequence_name | F45H11.3 | ||||||||
Molecular_name | F45H11.3 | ||||||||
F45H11.3.1 | |||||||||
CE33785 | |||||||||
Other_name | CELE_F45H11.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | hpo-35 | ||||||||
DB_info | Database | AceView | gene | 1K955 | |||||
WormQTL | gene | WBGene00009744 | |||||||
WormFlux | gene | WBGene00009744 | |||||||
NDB | locus_tag | CELE_F45H11.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009744|UniProtKB=Q93726 | |||||||
family | PTHR36942 | ||||||||
NCBI | gene | 172911 | |||||||
RefSeq | protein | NM_001264435.3 | |||||||
TREEFAM | TREEFAM_ID | TF322390 | |||||||
TrEMBL | UniProtAcc | Q93726 | |||||||
UniProt_GCRP | UniProtAcc | Q93726 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-35 | ||||
Split_into | WBGene00189958 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpo | ||||||||
Allele (69) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP1600 | ||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00010690 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00010689 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00010691 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | F45H11.3 encodes an unfamiliar 738-aa protein that inhibits DHC-1 invivo; F45H11.3 has no obvious non-Caenorhabditis homologs, but itsC-terminal ~150 residues are similar to K08H2.4 and K08H2.3; F45H11.3 isrequired for embryonic development in mass RNAi assays. | Paper_evidence | WBPaper00006395 | |||||
WBPaper00030897 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 26 Aug 2007 00:00:00 | ||||||||
Automated_description | Enriched in AVK and germ line based on RNA-seq studies. Is affected by several genes including nuo-6; isp-1; and mrps-5 based on RNA-seq; proteomic; and microarray studies. Is affected by eight chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F45H11.3 | |||||||
Corresponding_CDS_history | F45H11.3:wp47 | ||||||||
F45H11.3b:wp202 | |||||||||
Corresponding_transcript | F45H11.3.1 | ||||||||
Other_sequence | XI00400 | ||||||||
CRC05748_1 | |||||||||
CRC00322_1 | |||||||||
XIC03263_1 | |||||||||
CR00874 | |||||||||
Associated_feature | WBsf643674 | ||||||||
WBsf218421 | |||||||||
Experimental_info | RNAi_result (8) | ||||||||
Expr_pattern | Expr1024588 | ||||||||
Expr1034268 | |||||||||
Expr1151291 | |||||||||
Expr2012575 | |||||||||
Expr2030811 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (88) | |||||||||
Interaction (24) | |||||||||
Map_info | Map | I | Position | 4.95746 | Error | 0.002693 | |||
Positive | Positive_clone | F45H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035010 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |