WormBase Tree Display for Gene: WBGene00009672
expand all nodes | collapse all nodes | view schema
| WBGene00009672 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mog-7 | Person_evidence | WBPerson1725 | |||||
| Sequence_name | F43G9.12 | ||||||||
| Molecular_name | F43G9.12a | ||||||||
| F43G9.12a.1 | |||||||||
| CE46019 | |||||||||
| F43G9.12b | |||||||||
| CE45951 | |||||||||
| F43G9.12b.1 | |||||||||
| Other_name | CELE_F43G9.12 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mog-7 | ||||||||
| DB_info | Database | AceView | gene | 1J219 | |||||
| WormQTL | gene | WBGene00009672 | |||||||
| WormFlux | gene | WBGene00009672 | |||||||
| NDB | locus_tag | CELE_F43G9.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009672|UniProtKB=G5ECH1 | |||||||
| family | PTHR12214 | ||||||||
| NCBI | gene | 172662 | |||||||
| RefSeq | protein | NM_001263910.2 | |||||||
| NM_001263911.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315109 | |||||||
| TrEMBL | UniProtAcc | G5EBK6 | |||||||
| G5ECH1 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ECH1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2022 01:09:20 | WBPerson1983 | Name_change | CGC_name | mog-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mog | ||||||||
| Allele (41) | |||||||||
| Possibly_affected_by | WBVar02157781 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009767 | ||||||||
| 00009768 | |||||||||
| 00009769 | |||||||||
| 00009770 | |||||||||
| 00117304 | |||||||||
| 00117305 | |||||||||
| 00117306 | |||||||||
| 00117307 | |||||||||
| 00117308 | |||||||||
| Contained_in_operon | CEOP1492 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in spliceosomal complex disassembly. Predicted to be located in nucleus. Predicted to be part of U2-type post-mRNA release spliceosomal complex. Expressed in germ cell; oocyte; somatic cell; and sperm. Is an ortholog of human GCFC2 (GC-rich sequence DNA-binding factor 2) and PAXBP1 (PAX3 and PAX7 binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43G9.12a | |||||||
| F43G9.12b | |||||||||
| Corresponding_CDS_history | F43G9.12:wp225 | ||||||||
| Corresponding_transcript | F43G9.12a.1 | ||||||||
| F43G9.12b.1 | |||||||||
| Other_sequence (115) | |||||||||
| Associated_feature | WBsf643538 | ||||||||
| WBsf656649 | |||||||||
| WBsf984473 | |||||||||
| WBsf218183 | |||||||||
| WBsf218184 | |||||||||
| WBsf218185 | |||||||||
| Experimental_info | RNAi_result (30) | ||||||||
| Expr_pattern | Expr16011 | ||||||||
| Expr1019841 | |||||||||
| Expr1034228 | |||||||||
| Expr1151078 | |||||||||
| Expr2003685 | |||||||||
| Expr2021903 | |||||||||
| Drives_construct | WBCnstr00032006 | ||||||||
| Construct_product | WBCnstr00032006 | ||||||||
| Regulate_expr_cluster | WBPaper00062146:MOG-7-degron_1h_regulated | ||||||||
| WBPaper00062146:MOG-7-degron_2h_regulated | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (28) | |||||||||
| Map_info | Map | I | Position | 3.014 | |||||
| Positive | Positive_clone | F43G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040293 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061786 | |||||||||
| WBPaper00062146 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
