WormBase Tree Display for Gene: WBGene00009641
expand all nodes | collapse all nodes | view schema
| WBGene00009641 | SMap | S_parent | Sequence | F42G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F42G4.2 | |||||||
| Molecular_name | F42G4.2 | ||||||||
| F42G4.2.1 | |||||||||
| CE54216 | |||||||||
| Other_name | CELE_F42G4.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F42G4.2 | ||||||||
| DB_info | Database | AceView | gene | 2N339 | |||||
| WormQTL | gene | WBGene00009641 | |||||||
| WormFlux | gene | WBGene00009641 | |||||||
| NDB | locus_tag | CELE_F42G4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009641|UniProtKB=Q9XVN6 | |||||||
| family | PTHR37444 | ||||||||
| NCBI | gene | 174949 | |||||||
| RefSeq | protein | NM_001383976.1 | |||||||
| TREEFAM | TREEFAM_ID | TF317038 | |||||||
| TrEMBL | UniProtAcc | Q9XVN6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVN6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00007489 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008312 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009685 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020349 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ABplpppaaa; ABprpppaaa; arcade cell; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including nicotinic acid; manganese chloride; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42G4.2 | |||||||
| Corresponding_CDS_history | F42G4.2:wp137 | ||||||||
| F42G4.2:wp276 | |||||||||
| Corresponding_transcript | F42G4.2.1 | ||||||||
| Associated_feature | WBsf658333 | ||||||||
| WBsf658334 | |||||||||
| WBsf990304 | |||||||||
| WBsf990305 | |||||||||
| WBsf990306 | |||||||||
| WBsf1013553 | |||||||||
| WBsf222320 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014837 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032147 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047116 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028774 | ||||||||
| Expr1150985 | |||||||||
| Expr2003647 | |||||||||
| Expr2021865 | |||||||||
| Drives_construct | WBCnstr00032031 | ||||||||
| Construct_product | WBCnstr00032031 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Positive | Positive_clone | F42G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 13.8806 | |||||||
| Method | Gene |
