WormBase Tree Display for Gene: WBGene00009638
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WBGene00009638 | SMap | S_parent | Sequence | F42F12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nspc-14 | Person_evidence | WBPerson655 | |||||
Sequence_name | F42F12.7 | ||||||||
Molecular_name | F42F12.7 | ||||||||
F42F12.7.1 | |||||||||
CE31939 | |||||||||
Other_name | CELE_F42F12.7 | Accession_evidence | NDB | BX284606 | |||||
Public_name | nspc-14 | ||||||||
DB_info | Database | AceView | gene | XM976 | |||||
WormQTL | gene | WBGene00009638 | |||||||
WormFlux | gene | WBGene00009638 | |||||||
NDB | locus_tag | CELE_F42F12.7 | |||||||
NCBI | gene | 181395 | |||||||
RefSeq | protein | NM_182449.8 | |||||||
TREEFAM | TREEFAM_ID | TF318876 | |||||||
TrEMBL | UniProtAcc | G5EF55 | |||||||
UniProt_GCRP | UniProtAcc | G5EF55 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-14 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspc | ||||||||
Allele (27) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (259) | |||||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Enriched in ASER and excretory gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by fifteen chemicals including rotenone; mianserin; and D-glucose based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F42F12.7 | |||||||
Corresponding_CDS_history | F42F12.7:wp87 | ||||||||
Corresponding_transcript | F42F12.7.1 | ||||||||
Other_sequence | CR12238 | ||||||||
CBC00222_4 | |||||||||
CRC07389_1 | |||||||||
Associated_feature | WBsf238058 | ||||||||
Experimental_info | RNAi_result | WBRNAi00047106 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1150973 | ||||||||
Expr2014465 | |||||||||
Expr2032705 | |||||||||
Drives_construct | WBCnstr00032034 | ||||||||
Construct_product | WBCnstr00032034 | ||||||||
Microarray_results | SMD_F42F12.7 | ||||||||
A_12_P107617 | |||||||||
GPL8304_CE_WBGene00009638_A | |||||||||
GPL8673_F42F12_7P00063 | |||||||||
GPL8673_F42F12_7P00094 | |||||||||
GPL9450_F42F12.7 | |||||||||
cea2.d.25296 | |||||||||
Expression_cluster (163) | |||||||||
Interaction (55) | |||||||||
Map_info | Map | X | Position | 7.03287 | |||||
Positive | Positive_clone | F42F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064841 | ||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |