WormBase Tree Display for Gene: WBGene00009597
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| WBGene00009597 | SMap | S_parent | Sequence | F40G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F40G12.2 | |||||||
| Molecular_name | F40G12.2 | ||||||||
| F40G12.2.1 | |||||||||
| CE37970 | |||||||||
| Other_name | CELE_F40G12.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F40G12.2 | ||||||||
| DB_info | Database | AceView | gene | 5O740 | |||||
| WormQTL | gene | WBGene00009597 | |||||||
| WormFlux | gene | WBGene00009597 | |||||||
| NDB | locus_tag | CELE_F40G12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009597|UniProtKB=Q20247 | |||||||
| family | PTHR31897 | ||||||||
| NCBI | gene | 185562 | |||||||
| RefSeq | protein | NM_074128.4 | |||||||
| TrEMBL | UniProtAcc | Q20247 | |||||||
| UniProt_GCRP | UniProtAcc | Q20247 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00056964 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| WBGene00192302 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00027336 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| chrV_pilon.g16467 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in NSM and neurons based on tiling array; single-cell RNA-seq; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and clk-1 based on tiling array; RNA-seq; and microarray studies. Is affected by paraquat based on RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40G12.2 | |||||||
| Corresponding_CDS_history | F40G12.2:wp138 | ||||||||
| Corresponding_transcript | F40G12.2.1 | ||||||||
| Associated_feature | WBsf234923 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014678 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032047 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095051 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046895 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015279 | ||||||||
| Expr1150762 | |||||||||
| Expr2003546 | |||||||||
| Expr2021763 | |||||||||
| Drives_construct | WBCnstr00032071 | ||||||||
| Construct_product | WBCnstr00032071 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (51) | |||||||||
| Interaction | WBInteraction000433587 | ||||||||
| WBInteraction000434092 | |||||||||
| WBInteraction000521214 | |||||||||
| WBInteraction000547793 | |||||||||
| Map_info | Positive | Positive_clone | F40G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.21453 | |||||||
| Method | Gene |
