WormBase Tree Display for Gene: WBGene00009588
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WBGene00009588 | SMap | S_parent | Sequence | F40F11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F40F11.3 | |||||||
Molecular_name | F40F11.3a | ||||||||
F40F11.3a.1 | |||||||||
CE05862 | |||||||||
F40F11.3b | |||||||||
CE48071 | |||||||||
F40F11.3b.1 | |||||||||
Other_name | CELE_F40F11.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F40F11.3 | ||||||||
DB_info | Database | AceView | gene | 4M354 | |||||
WormQTL | gene | WBGene00009588 | |||||||
WormFlux | gene | WBGene00009588 | |||||||
NDB | locus_tag | CELE_F40F11.3 | |||||||
NCBI | gene | 185547 | |||||||
RefSeq | protein | NM_001392401.1 | |||||||
NM_001276864.3 | |||||||||
TrEMBL | UniProtAcc | Q20208 | |||||||
K8ERW1 | |||||||||
UniProt_GCRP | UniProtAcc | K8ERW1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (16) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; germ line; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by twelve chemicals including hydrogen sulfide; rotenone; and levamisole based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: COMPASS (Complex proteins associated with Set1p) component shg1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F40F11.3a | |||||||
F40F11.3b | |||||||||
Corresponding_transcript | F40F11.3a.1 | ||||||||
F40F11.3b.1 | |||||||||
Other_sequence | CJC07452_1 | ||||||||
Associated_feature | WBsf667647 | ||||||||
WBsf997887 | |||||||||
WBsf997888 | |||||||||
WBsf1018232 | |||||||||
WBsf230896 | |||||||||
Experimental_info | RNAi_result | WBRNAi00062027 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046851 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032024 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008772 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021462 | ||||||||
Expr1034198 | |||||||||
Expr1150722 | |||||||||
Expr2003529 | |||||||||
Expr2021746 | |||||||||
Drives_construct | WBCnstr00032079 | ||||||||
Construct_product | WBCnstr00032079 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (107) | |||||||||
Interaction (49) | |||||||||
Map_info | Positive | Positive_clone | F40F11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 5.021 | |||||||
Method | Gene |