WormBase Tree Display for Gene: WBGene00009584
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| WBGene00009584 | SMap | S_parent | Sequence | F40F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | drap-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F40F9.7 | ||||||||
| Molecular_name | F40F9.7a | ||||||||
| F40F9.7a.1 | |||||||||
| CE05856 | |||||||||
| F40F9.7b | |||||||||
| CE33580 | |||||||||
| F40F9.7a.2 | |||||||||
| F40F9.7a.3 | |||||||||
| F40F9.7b.1 | |||||||||
| F40F9.7b.2 | |||||||||
| Other_name | CELE_F40F9.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | drap-1 | ||||||||
| DB_info | Database | AceView | gene | 5K213 | |||||
| WormQTL | gene | WBGene00009584 | |||||||
| WormFlux | gene | WBGene00009584 | |||||||
| NDB | locus_tag | CELE_F40F9.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009584|UniProtKB=Q20237 | |||||||
| family | PTHR10252 | ||||||||
| NCBI | gene | 179365 | |||||||
| RefSeq | protein | NM_001392584.1 | |||||||
| NM_001392583.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF313964 | |||||||
| TrEMBL | UniProtAcc | Q86G95 | |||||||
| Q20237 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20237 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Sep 2011 16:00:59 | WBPerson2970 | Name_change | CGC_name | drap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | drap | ||||||||
| Allele (59) | |||||||||
| Strain | WBStrain00037093 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067587 | ||||||||
| 00067588 | |||||||||
| 00067589 | |||||||||
| 00067590 | |||||||||
| 00067591 | |||||||||
| 00067592 | |||||||||
| 00117228 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00013150 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00017742 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA polymerase II general transcription initiation factor activity and core promoter sequence-specific DNA binding activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of negative cofactor 2 complex. Is an ortholog of human DRAP1 (DR1 associated protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40F9.7a | |||||||
| F40F9.7b | |||||||||
| Corresponding_transcript | F40F9.7a.1 | ||||||||
| F40F9.7a.2 | |||||||||
| F40F9.7a.3 | |||||||||
| F40F9.7b.1 | |||||||||
| F40F9.7b.2 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf647102 | ||||||||
| WBsf647104 | |||||||||
| WBsf661016 | |||||||||
| WBsf661059 | |||||||||
| WBsf661584 | |||||||||
| WBsf981980 | |||||||||
| WBsf1000978 | |||||||||
| WBsf1020215 | |||||||||
| WBsf232290 | |||||||||
| WBsf232291 | |||||||||
| Transcription_factor | WBTranscriptionFactor000705 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00046889 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1019696 | ||||||||
| Expr1034195 | |||||||||
| Expr1150755 | |||||||||
| Expr2011082 | |||||||||
| Expr2029319 | |||||||||
| Drives_construct | WBCnstr00032083 | ||||||||
| Construct_product | WBCnstr00016544 | ||||||||
| WBCnstr00016545 | |||||||||
| WBCnstr00032083 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Map | V | Position | 2.12464 | Error | 0.003777 | |||
| Positive | Positive_clone | F40F9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
