WormBase Tree Display for Gene: WBGene00009576
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WBGene00009576 | SMap | S_parent | Sequence | F40F8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F40F8.3 | |||||
Molecular_name | F40F8.3 | ||||||
F40F8.3.1 | |||||||
CE40361 | |||||||
Other_name | CELE_F40F8.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | F40F8.3 | ||||||
DB_info | Database | AceView | gene | 2L421 | |||
2L423 | |||||||
WormQTL | gene | WBGene00009576 | |||||
WormFlux | gene | WBGene00009576 | |||||
NDB | locus_tag | CELE_F40F8.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009576|UniProtKB=Q20231 | |||||
family | PTHR31965 | ||||||
NCBI | gene | 185540 | |||||
RefSeq | protein | NM_063986.5 | |||||
TREEFAM | TREEFAM_ID | TF336306 | |||||
TrEMBL | UniProtAcc | Q20231 | |||||
UniProt_GCRP | UniProtAcc | Q20231 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (20) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00067576 | ||||||
Contained_in_operon | CEOP2520 | ||||||
Ortholog (24) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human TMEM42 (transmembrane protein 42). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F40F8.3 | |||||
Corresponding_CDS_history | F40F8.3:wp162 | ||||||
Corresponding_transcript | F40F8.3.1 | ||||||
Associated_feature | WBsf644652 | ||||||
WBsf222100 | |||||||
Experimental_info | RNAi_result (2) | ||||||
Expr_pattern | Expr1011115 | ||||||
Expr1034189 | |||||||
Expr1150742 | |||||||
Expr2003538 | |||||||
Expr2021755 | |||||||
Drives_construct | WBCnstr00032090 | ||||||
Construct_product | WBCnstr00032090 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (64) | |||||||
SAGE_tag | SAGE:aggacttaaaagaggaa | Strand | Sense | ||||
Unambiguously_mapped | |||||||
SAGE:atcagcaggagccacca | Strand | Antisense | |||||
SAGE:acttttgtcc | Strand | Antisense | |||||
SAGE:aggacttaaa | Strand | Sense | |||||
Unambiguously_mapped | |||||||
Map_info | Positive | Positive_clone | F40F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | 3.32262 | |||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Method | Gene |