WormBase Tree Display for Gene: WBGene00009565
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| WBGene00009565 | SMap | S_parent | Sequence | F39H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F39H11.1 | |||||||
| Molecular_name | F39H11.1 | ||||||||
| F39H11.1.1 | |||||||||
| CE27158 | |||||||||
| Other_name | CELE_F39H11.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F39H11.1 | ||||||||
| DB_info | Database | AceView | gene | 1J273 | |||||
| WormQTL | gene | WBGene00009565 | |||||||
| WormFlux | gene | WBGene00009565 | |||||||
| NDB | locus_tag | CELE_F39H11.1 | |||||||
| NCBI | gene | 172675 | |||||||
| RefSeq | protein | NM_059954.8 | |||||||
| TREEFAM | TREEFAM_ID | TF313182 | |||||||
| TrEMBL | UniProtAcc | P90867 | |||||||
| UniProt_GCRP | UniProtAcc | P90867 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| Strain | WBStrain00003771 | ||||||||
| WBStrain00036934 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by five chemicals including paraquat; resveratrol; and Humic Substances based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SWR1-complex protein 5/Craniofacial development protein 1/2; BCNT-C domain; and Bucentaur or craniofacial development. Is an ortholog of human CFDP1 (craniofacial development protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F39H11.1 | |||||||
| Corresponding_CDS_history | F39H11.1:wp47 | ||||||||
| Corresponding_transcript | F39H11.1.1 | ||||||||
| Other_sequence | JI471710.1 | ||||||||
| JI475448.1 | |||||||||
| Associated_feature | WBsf643543 | ||||||||
| WBsf643544 | |||||||||
| WBsf218194 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116528 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007992 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003639 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031994 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046794 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6003 | ||||||||
| Expr1013840 | |||||||||
| Expr1034184 | |||||||||
| Expr1150669 | |||||||||
| Expr2003508 | |||||||||
| Expr2021723 | |||||||||
| Drives_construct | WBCnstr00004193 | ||||||||
| WBCnstr00032100 | |||||||||
| Construct_product | WBCnstr00032100 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | F39H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.01843 | |||||||
| Reference | WBPaper00031320 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
