WormBase Tree Display for Gene: WBGene00009561
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WBGene00009561 | SMap | S_parent | Sequence | F39D8 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (71) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (27) | ||||||
Paralog | WBGene00004124 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00009099 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00044582 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00011817 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00219375 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00022386 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including ADE sheath cell; anterior ganglion (ant); anterior hypodermis; sensory neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; RNA-seq; and microarray studies. Is affected by fourteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Cystine-knot cytokine. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F39D8.3a | ||||
F39D8.3b | ||||||
F39D8.3c | ||||||
F39D8.3d | ||||||
Corresponding_CDS_history | F39D8.3:wp101 | |||||
Corresponding_transcript | F39D8.3a.1 | |||||
F39D8.3a.2 | ||||||
F39D8.3b.1 | ||||||
F39D8.3c.1 | ||||||
F39D8.3d.1 | ||||||
Other_sequence (13) | ||||||
Associated_feature | WBsf663637 | |||||
WBsf663638 | ||||||
WBsf1008215 | ||||||
WBsf1008216 | ||||||
WBsf1008217 | ||||||
WBsf1024588 | ||||||
WBsf1024589 | ||||||
Experimental_info | RNAi_result | WBRNAi00031987 | Inferred_automatically | RNAi_primary | ||
WBRNAi00046771 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014599 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1021445 | |||||
Expr1034182 | ||||||
Expr1150645 | ||||||
Expr2003498 | ||||||
Expr2021713 | ||||||
Drives_construct | WBCnstr00032103 | |||||
Construct_product | WBCnstr00032103 | |||||
Microarray_results (23) | ||||||
Expression_cluster (163) | ||||||
Interaction (105) | ||||||
Map_info | Positive | Positive_clone | F39D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | X | 22.6089 | ||||
Reference | WBPaper00064898 | |||||
Method | Gene |