WormBase Tree Display for Gene: WBGene00009523
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WBGene00009523 | SMap | S_parent | Sequence | F38A1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (62) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (55) | |||||||
Paralog (45) | |||||||
Structured_description | Automated_description | Enriched in OLL; PVD; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on tiling array; microarray; and RNA-seq studies. Is affected by sixteen chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F38A1.10 | |||||
Corresponding_transcript | F38A1.10.1 | ||||||
Other_sequence | FG584368.1 | ||||||
Associated_feature | WBsf651645 | ||||||
Experimental_info | RNAi_result | WBRNAi00046665 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014520 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046656 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031936 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014512 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031932 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (4) | |||||||
Microarray_results (17) | |||||||
Expression_cluster (135) | |||||||
Interaction | WBInteraction000291860 | ||||||
WBInteraction000335787 | |||||||
WBInteraction000373588 | |||||||
WBInteraction000383608 | |||||||
WBInteraction000393191 | |||||||
WBInteraction000397642 | |||||||
Map_info | Map | IV | Position | -20.995 | Error | 0.043445 | |
Positive | Positive_clone | F38A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031686 | ||||||
WBPaper00062585 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |