WormBase Tree Display for Gene: WBGene00009306
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WBGene00009306 | SMap | S_parent | Sequence | F32A7 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | maph | |||||
Allele (77) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (23) | ||||||
Ortholog (48) | ||||||
Paralog | WBGene00007966 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
WormBase-Compara | ||||||
WBGene00009113 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
WormBase-Compara | ||||||
WBGene00018325 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
Structured_description | Automated_description | Predicted to enable actin binding activity and microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization; neuron projection development; and regulation of microtubule depolymerization. Located in microtubule cytoskeleton. Expressed in body wall musculature; egg-laying apparatus; hypodermis; intestinal cell; and neurons. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness and periventricular nodular heterotopia. Is an ortholog of human MAP1A (microtubule associated protein 1A); MAP1B (microtubule associated protein 1B); and MAP1S (microtubule associated protein 1S). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0050454 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6836) | |
DOID:0050564 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6836) | |||
Molecular_info | Corresponding_CDS | F32A7.5a | ||||
F32A7.5b | ||||||
F32A7.5c | ||||||
F32A7.5d | ||||||
Corresponding_transcript | F32A7.5a.1 | |||||
F32A7.5b.1 | ||||||
F32A7.5c.1 | ||||||
F32A7.5d.1 | ||||||
Other_sequence | CJC09850_1 | |||||
CRC06312_1 | ||||||
CR00627 | ||||||
CRC10472_1 | ||||||
CR01632 | ||||||
Associated_feature | WBsf657122 | |||||
WBsf657123 | ||||||
WBsf717609 | ||||||
WBsf986244 | ||||||
WBsf1011301 | ||||||
WBsf218840 | ||||||
Experimental_info | RNAi_result (41) | |||||
Expr_pattern | Expr13645 | |||||
Expr1025913 | ||||||
Expr1034067 | ||||||
Expr1149977 | ||||||
Expr2013376 | ||||||
Expr2031608 | ||||||
Drives_construct | WBCnstr00032296 | |||||
Construct_product | WBCnstr00032296 | |||||
Microarray_results (30) | ||||||
Expression_cluster (175) | ||||||
Interaction (116) | ||||||
Map_info | Map | I | Position | 27.956 | ||
Positive | Positive_clone | F32A7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00029395 | |||||
WBPaper00038491 | ||||||
WBPaper00049959 | ||||||
WBPaper00055090 | ||||||
WBPaper00059214 | ||||||
WBPaper00059548 | ||||||
WBPaper00060754 | ||||||
WBPaper00062248 | ||||||
WBPaper00064789 | ||||||
WBPaper00065165 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |