WormBase Tree Display for Gene: WBGene00009223
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| WBGene00009223 | SMap | S_parent | Sequence | F28F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mdt-28 | Paper_evidence | WBPaper00050331 | |||||
| Person_evidence | WBPerson3591 | ||||||||
| Sequence_name | F28F8.5 | ||||||||
| Molecular_name | F28F8.5a | ||||||||
| F28F8.5a.1 | |||||||||
| CE09759 | |||||||||
| F28F8.5b | |||||||||
| CE47319 | |||||||||
| F28F8.5b.1 | |||||||||
| Other_name | CELE_F28F8.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mdt-28 | ||||||||
| DB_info | Database | AceView | gene | 5Q54 | |||||
| WormQTL | gene | WBGene00009223 | |||||||
| WormFlux | gene | WBGene00009223 | |||||||
| NDB | locus_tag | CELE_F28F8.5 | |||||||
| NCBI | gene | 180048 | |||||||
| RefSeq | protein | NM_001392672.1 | |||||||
| NM_001269744.2 | |||||||||
| SwissProt | UniProtAcc | H9G301 | |||||||
| UniProt_GCRP | UniProtAcc | H9G301 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Oct 2016 10:58:09 | WBPerson2970 | Name_change | CGC_name | mdt-28 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mdt | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00051338 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023781 | ||||||||
| 00023782 | |||||||||
| 00023783 | |||||||||
| 00023784 | |||||||||
| Contained_in_operon | CEOP5444 | ||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cytoplasm and nucleus. Expressed in several structures, including gonad; hypodermis; and intestine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28F8.5a | |||||||
| F28F8.5b | |||||||||
| Corresponding_transcript | F28F8.5a.1 | ||||||||
| F28F8.5b.1 | |||||||||
| Other_sequence | Tcol_isotig07453 | ||||||||
| CBC03184_1 | |||||||||
| Tcol_isotig07454 | |||||||||
| Tcir_isotig08328 | |||||||||
| CJC00769_1 | |||||||||
| Acan_isotig12103 | |||||||||
| NBC01087_1 | |||||||||
| NB08495 | |||||||||
| Associated_feature | WBsf982059 | ||||||||
| WBsf235071 | |||||||||
| WBsf235072 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112429 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116395 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045851 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008716 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116343 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066892 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2008 | ||||||||
| Expr12649 | |||||||||
| Expr13396 | |||||||||
| Expr13397 | |||||||||
| Expr16233 | |||||||||
| Expr1012347 | |||||||||
| Expr1034026 | |||||||||
| Expr1149756 | |||||||||
| Expr2013480 | |||||||||
| Expr2031714 | |||||||||
| Drives_construct | WBCnstr00022354 | ||||||||
| WBCnstr00039312 | |||||||||
| Construct_product | WBCnstr00022354 | ||||||||
| WBCnstr00039312 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (38) | |||||||||
| Anatomy_function | WBbtf0421 | ||||||||
| Map_info | Map | V | Position | 8.38854 | |||||
| Positive | Positive_clone | F28F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00050331 | ||||||||
| WBPaper00051354 | |||||||||
| WBPaper00054667 | |||||||||
| WBPaper00059726 | |||||||||
| WBPaper00062463 | |||||||||
| WBPaper00065308 | |||||||||
| WBPaper00066161 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
