WormBase Tree Display for Gene: WBGene00009195

WBGene00009195 SMap: S_parent: Sequence: F28B1
  Identity: Version: 2
    Name: CGC_name: hpo-33 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: F28B1.1
      Molecular_name: F28B1.1
        F28B1.1.1
        CE41802
      Other_name: CELE_F28B1.1 Accession_evidence: NDB BX284605
      Public_name: hpo-33
    DB_info: Database: AceView gene 5R517
        WormQTL gene WBGene00009195
        WormFlux gene WBGene00009195
        NDB locus_tag CELE_F28B1.1
        NCBI gene 185039
        RefSeq protein NM_074915.4
        TREEFAM TREEFAM_ID TF343993
        TrEMBL UniProtAcc O45411
        UniProt_GCRP UniProtAcc O45411
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-33
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (59)
    RNASeq_FPKM (74)
    Ortholog: WBGene00039311 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00144905 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00057828 Caenorhabditis remanei From_analysis: Inparanoid_8
      CSP26.g3184 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g310 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_I.g2758 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_I.g2759 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold58.g341 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00069.g3254 Caenorhabditis sinica From_analysis: WormBase-Compara
      chrV_pilon.g17347 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007727 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00045381 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00050976 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00010129 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00009197 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00009196 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007673 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012305 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in male-specific anatomical entity and in male based on RNA-seq and microarray studies. Is affected by several genes including eat-2; sir-2.1; and tph-1 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including tryptophan; stavudine; and Zidovudine based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F28B1.1
    Corresponding_CDS_history: F28B1.1:wp184
    Corresponding_transcript: F28B1.1.1
    Associated_feature: WBsf1002589
      WBsf1021226
  Experimental_info: RNAi_result: WBRNAi00045775 Inferred_automatically: RNAi_primary
      WBRNAi00014021 Inferred_automatically: RNAi_primary
      WBRNAi00088669 Inferred_automatically: RNAi_primary
      WBRNAi00088776 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021048
      Expr1149686
      Expr2012573
    Drives_construct: WBCnstr00032381
    Construct_product: WBCnstr00032381
    Microarray_results (13)
    Expression_cluster (57)
    Interaction: WBInteraction000185978
      WBInteraction000233191
      WBInteraction000356127
  Map_info: Map: V Position: 12.3795 Error: 0.048229
    Positive: Positive_clone: F28B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene