WormBase Tree Display for Gene: WBGene00009078
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WBGene00009078 | SMap | S_parent | Sequence | F23B2 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rpb | ||||||
Allele (16) | |||||||
Strain | WBStrain00049346 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog | WBGene00040472 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||
OrthoMCL | |||||||
OMA | |||||||
Inparanoid_8 | |||||||
WBGene00063906 | Caenorhabditis remanei | From_analysis | OMA | ||||
TreeFam | |||||||
Inparanoid_8 | |||||||
SGD:S000001185 | Saccharomyces cerevisiae | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
PhylomeDB | |||||||
SonicParanoid | |||||||
FB:FBgn0262954 | Drosophila melanogaster | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
PhylomeDB | |||||||
SonicParanoid | |||||||
ZFIN:ZDB-GENE-070820-18 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
SonicParanoid | |||||||
HGNC:9198 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
PhylomeDB | |||||||
SonicParanoid | |||||||
MGI:102725 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
PhylomeDB | |||||||
SonicParanoid | |||||||
RGD:2319895 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||
Hieranoid | |||||||
Inparanoid | |||||||
OMA | |||||||
OrthoFinder | |||||||
OrthoInspector | |||||||
Panther | |||||||
PhylomeDB | |||||||
SonicParanoid | |||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity; DNA-directed 5'-3' RNA polymerase activity; and zinc ion binding activity. Predicted to contribute to RNA polymerase I activity; RNA polymerase II activity; and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I; transcription by RNA polymerase II; and transcription by RNA polymerase III. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is an ortholog of human POLR2K (RNA polymerase II, I and III subunit K). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F23B2.13a | |||||
F23B2.13b | |||||||
Corresponding_transcript | F23B2.13a.1 | ||||||
F23B2.13b.1 | |||||||
Other_sequence (303) | |||||||
Associated_feature | WBsf652039 | ||||||
WBsf997367 | |||||||
WBsf230514 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | IV | Position | 4.06918 | Error | 0.005755 | |
Positive | Positive_clone | F23B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00029038 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059527 | |||||||
WBPaper00065275 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |