WormBase Tree Display for Gene: WBGene00009063
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WBGene00009063 | SMap | S_parent | Sequence | F22G12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F22G12.3 | |||||||
Molecular_name | F22G12.3 | ||||||||
F22G12.3.1 | |||||||||
CE15890 | |||||||||
Other_name | CELE_F22G12.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | F22G12.3 | ||||||||
DB_info | Database | AceView | gene | 1N737 | |||||
WormQTL | gene | WBGene00009063 | |||||||
WormFlux | gene | WBGene00009063 | |||||||
NDB | locus_tag | CELE_F22G12.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009063|UniProtKB=O45397 | |||||||
family | PTHR21503 | ||||||||
NCBI | gene | 184868 | |||||||
RefSeq | protein | NM_060903.3 | |||||||
TREEFAM | TREEFAM_ID | TF343458 | |||||||
TrEMBL | UniProtAcc | O45397 | |||||||
UniProt_GCRP | UniProtAcc | O45397 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (26) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (193) | |||||||||
Paralog (59) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABalppappa; ABarappppa; ABplpaappa; ABplppaapa; and ADE sheath cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and mex-3 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; rotenone; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F22G12.3 | |||||||
Corresponding_transcript | F22G12.3.1 | ||||||||
Associated_feature | WBsf643788 | ||||||||
WBsf643789 | |||||||||
WBsf218684 | |||||||||
Experimental_info | RNAi_result | WBRNAi00003432 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085641 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025190 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025191 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045362 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031298 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025192 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023873 | ||||||||
Expr1033951 | |||||||||
Expr1149286 | |||||||||
Expr2002886 | |||||||||
Expr2021104 | |||||||||
Drives_construct | WBCnstr00032489 | ||||||||
Construct_product | WBCnstr00032489 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (75) | |||||||||
Interaction (123) | |||||||||
Map_info | Positive | Positive_clone | F22G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 17.225 | |||||||
Reference | WBPaper00012854 | ||||||||
Method | Gene |