WormBase Tree Display for Gene: WBGene00009059
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WBGene00009059 | SMap | S_parent | Sequence | F22E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | chw-1 | |||||||
Sequence_name | F22E12.2 | ||||||||
Molecular_name | F22E12.2 | ||||||||
F22E12.2.1 | |||||||||
CE05696 | |||||||||
Other_name | CELE_F22E12.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | chw-1 | ||||||||
DB_info | Database | AceView | gene | 5K943 | |||||
WormQTL | gene | WBGene00009059 | |||||||
WormFlux | gene | WBGene00009059 | |||||||
NDB | locus_tag | CELE_F22E12.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009059|UniProtKB=Q19739 | |||||||
family | PTHR24072 | ||||||||
NCBI | gene | 184848 | |||||||
RefSeq | protein | NM_073285.2 | |||||||
TREEFAM | TREEFAM_ID | TF321839 | |||||||
TrEMBL | UniProtAcc | Q19739 | |||||||
UniProt_GCRP | UniProtAcc | Q19739 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 Jan 2005 13:10:39 | WBPerson2970 | Name_change | CGC_name | chw-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chw | ||||||||
Allele (28) | |||||||||
Strain | WBStrain00031576 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (38) | |||||||||
Paralog (8) | |||||||||
Structured_description | Automated_description | Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Involved in establishment or maintenance of cell polarity and vulval development. Predicted to be located in plasma membrane. Expressed in several structures, including P3.pa; P3.pp; P4.pa; P4.pp; and P8.pa. Is an ortholog of human RHOU (ras homolog family member U). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F22E12.2 | |||||||
Corresponding_transcript | F22E12.2.1 | ||||||||
Other_sequence | Oden_isotig21620 | ||||||||
CR01151 | |||||||||
Dviv_isotig24876 | |||||||||
Oden_isotig24504 | |||||||||
CRC02711_1 | |||||||||
Associated_feature | WBsf661629 | ||||||||
Experimental_info | RNAi_result (8) | ||||||||
Expr_pattern | Expr12413 | ||||||||
Expr1020601 | |||||||||
Expr1033950 | |||||||||
Expr1149251 | |||||||||
Expr2010008 | |||||||||
Expr2028249 | |||||||||
Drives_construct | WBCnstr00020742 | ||||||||
WBCnstr00032492 | |||||||||
Construct_product | WBCnstr00032492 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (119) | |||||||||
Interaction | WBInteraction000031287 | ||||||||
WBInteraction000032007 | |||||||||
WBInteraction000343952 | |||||||||
WBInteraction000441076 | |||||||||
WBInteraction000534753 | |||||||||
WBInteraction000534754 | |||||||||
WBInteraction000563423 | |||||||||
Map_info | Map | V | Position | 2.56276 | Error | 0.001499 | |||
Positive | Positive_clone | F22E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4678 | |||||||
5046 | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |