WormBase Tree Display for Gene: WBGene00009041
expand all nodes | collapse all nodes | view schema
| WBGene00009041 | SMap | S_parent | Sequence | F22B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cut-3 | Person_evidence | WBPerson52 | |||||
| Sequence_name | F22B5.3 | ||||||||
| Molecular_name | F22B5.3 | ||||||||
| F22B5.3.1 | |||||||||
| CE02198 | |||||||||
| Other_name | CELE_F22B5.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cut-3 | ||||||||
| DB_info | Database | AceView | gene | 2I736 | |||||
| WormQTL | gene | WBGene00009041 | |||||||
| WormFlux | gene | WBGene00009041 | |||||||
| NDB | locus_tag | CELE_F22B5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009041|UniProtKB=Q19707 | |||||||
| family | PTHR22907 | ||||||||
| NCBI | gene | 174347 | |||||||
| RefSeq | protein | NM_063379.8 | |||||||
| SwissProt | UniProtAcc | Q19707 | |||||||
| TREEFAM | TREEFAM_ID | TF315307 | |||||||
| UniProt_GCRP | UniProtAcc | Q19707 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Nov 2005 10:56:53 | WBPerson2970 | Name_change | CGC_name | cut-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cut | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00036522 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065576 | ||||||||
| 00065577 | |||||||||
| 00065578 | |||||||||
| 00065579 | |||||||||
| Ortholog (43) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22B5.3 | |||||||
| Corresponding_transcript | F22B5.3.1 | ||||||||
| Other_sequence (134) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061282 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013729 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033524 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045278 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017776 | ||||||||
| Expr1033941 | |||||||||
| Expr1149208 | |||||||||
| Expr2010600 | |||||||||
| Expr2028840 | |||||||||
| Drives_construct | WBCnstr00032504 | ||||||||
| Construct_product | WBCnstr00032504 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (216) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | II | Position | 0.793938 | Error | 0.006658 | |||
| Positive | Positive_clone | F22B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00011621 | ||||||||
| WBPaper00018538 | |||||||||
| WBPaper00025242 | |||||||||
| WBPaper00031923 | |||||||||
| WBPaper00033244 | |||||||||
| WBPaper00055435 | |||||||||
| WBPaper00064676 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
