WormBase Tree Display for Gene: WBGene00008973
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WBGene00008973 | SMap | S_parent | Sequence | F20D1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | flwr-1 | |||||
Sequence_name | F20D1.1 | ||||||
Molecular_name | F20D1.1 | ||||||
F20D1.1.1 | |||||||
CE09494 | |||||||
Other_name | CELE_F20D1.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | flwr-1 | ||||||
DB_info | Database | AceView | gene | XP588 | |||
WormQTL | gene | WBGene00008973 | |||||
WormFlux | gene | WBGene00008973 | |||||
NDB | locus_tag | CELE_F20D1.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008973|UniProtKB=Q93533 | |||||
family | PTHR13314 | ||||||
NCBI | gene | 181591 | |||||
RefSeq | protein | NM_078083.7 | |||||
TREEFAM | TREEFAM_ID | TF105629 | |||||
TrEMBL | UniProtAcc | Q93533 | |||||
UniProt_GCRP | UniProtAcc | Q93533 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | flwr | ||||||
Allele (35) | |||||||
Strain | WBStrain00035299 | ||||||
WBStrain00032983 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (33) | |||||||
Structured_description | Automated_description | Predicted to enable calcium channel activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in synaptic vesicle membrane. Expressed in several structures, including anterior gonad arm. Is an ortholog of human CACFD1 (calcium channel flower domain containing 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F20D1.1 | |||||
Corresponding_transcript | F20D1.1.1 | ||||||
Other_sequence (53) | |||||||
Associated_feature | WBsf654621 | ||||||
WBsf671312 | |||||||
WBsf671313 | |||||||
WBsf1008052 | |||||||
WBsf1008053 | |||||||
WBsf1008054 | |||||||
WBsf1024491 | |||||||
WBsf238272 | |||||||
WBsf238273 | |||||||
WBsf238274 | |||||||
Experimental_info | RNAi_result | WBRNAi00013610 | Inferred_automatically | RNAi_primary | |||
WBRNAi00033264 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001605 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045092 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram896 | ||||||
Expr7512 | |||||||
Expr13092 | |||||||
Expr1021978 | |||||||
Expr1033905 | |||||||
Expr1149042 | |||||||
Expr2002778 | |||||||
Expr2020996 | |||||||
Drives_construct | WBCnstr00001109 | ||||||
WBCnstr00012657 | |||||||
WBCnstr00032555 | |||||||
Construct_product | WBCnstr00032555 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (156) | |||||||
Interaction (72) | |||||||
Map_info | Map | X | Position | 21.6111 | |||
Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |